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foieGras
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Download and install foieGras package within the R console
Install from CRAN:
install.packages("foieGras")
Install from Github:
library("remotes")
install_github("cran/foieGras")
Install by package version:
library("remotes")
install_version("foieGras", "0.7-6")
Attach the package and use:
library("foieGras")
Maintained by
Ian Jonsen
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[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-04-02
Latest Update: 2022-12-12
Description:
Fits continuous-time random walk and correlated random walk state-space models for quality control animal tracking data Argos processed light-level geolocation GPS. Template Model Builder TMB is used for fast estimation. The Argos data can be older least squares-based locations newer Kalman filter-based locations with error ellipse information or a mixture of both. The models estimate two sets of location states corresponding to 1 each observation which are usually irregularly timed and 2 user-specified time intervals regular or irregular. Latent variable models are provided to estimate move persistence along tracks as an index of behaviour. Track simulation functions are provided. Jonsen I McMahon CR Patterson TA Auger-Mth M Harcourt R Hindell MA Bestley S 2019 Movement responses to environment fast inference of variation among southern elephant seals with a mixed effects model. Ecology 100e02566 doi10.1002ecy.2566.
How to cite:
Ian Jonsen (2019). foieGras: Fit Continuous-Time State-Space and Latent Variable Models for
Quality Control of Argos Satellite (and Other) Telemetry Data
and for Estimating Movement Behaviour. R package version 0.7-6, https://cran.r-project.org/web/packages/foieGras. Accessed 21 Nov. 2024.
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