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flashier  

Empirical Bayes Matrix Factorization
View on CRAN: Click here


Download and install flashier package within the R console
Install from CRAN:
install.packages("flashier")

Install from Github:
library("remotes")
install_github("cran/flashier")

Install by package version:
library("remotes")
install_version("flashier", "1.0.7")



Attach the package and use:
library("flashier")
Maintained by
Jason Willwerscheid
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-10-17
Latest Update: 2023-10-17
Description:
Methods for matrix factorization based on Wang and Stephens (2021) .
How to cite:
Jason Willwerscheid (2023). flashier: Empirical Bayes Matrix Factorization. R package version 1.0.7, https://cran.r-project.org/web/packages/flashier. Accessed 22 Dec. 2024.
Previous versions and publish date:
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Complete documentation for flashier
Functions, R codes and Examples using the flashier R package
Some associated functions: fitted.flash . fitted.flash_fit . flash . flash_add_intercept . flash_backfit . flash_clear_timeout . flash_conv_crit_elbo_diff . flash_conv_crit_max_chg . flash_conv_crit_max_chg_F . flash_conv_crit_max_chg_L . flash_ebnm . flash_factors_fix . flash_factors_init . flash_factors_remove . flash_factors_reorder . flash_factors_set_to_zero . flash_factors_unfix . flash_fit . flash_greedy . flash_greedy_init_default . flash_greedy_init_irlba . flash_greedy_init_softImpute . flash_init . flash_nullcheck . flash_set_conv_crit . flash_set_timeout . flash_set_verbose . flash_verbose_elbo . flash_verbose_elbo_diff . flash_verbose_max_chg . flash_verbose_max_chg_F . flash_verbose_max_chg_L . gtex . gtex_colors . ldf . plot.flash . residuals.flash . residuals.flash_fit . 
Some associated R codes: arg_checks.R . backfit.R . backfit_parallel.R . data.R . extrapolate.R . factor_add.R . factor_init.R . factor_update.R . flash.R . flash_add_intercept.R . flash_backfit.R . flash_conv_crit_fns.R . flash_ebnm.R . flash_factors_fix.R . flash_factors_init.R . flash_factors_remove.R . flash_factors_reorder.R . flash_fit_object.R . flash_greedy.R . flash_greedy_init_fns.R . flash_init.R . flash_methods.R . flash_nullcheck.R . flash_set_conv_crit.R . flash_set_timeout.R . flash_set_verbose.R . flash_verbose_fns.R . helpers.R . objective.R . ops_fullrank.R . ops_lowrank.R . ops_nmode_products.R . ops_r1.R . residuals_and_R2.R . sampler.R . set_data.R . tau.R . verbose_announcements.R . warmstart_sanity_check.R . wrapup.R .  Full flashier package functions and examples
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