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file2meco
View on CRAN: Click
here
Download and install file2meco package within the R console
Install from CRAN:
install.packages("file2meco")
Install from Github:
library("remotes")
install_github("cran/file2meco") Install by package version:
library("remotes")
install_version("file2meco", "0.9.1") Attach the package and use:
library("file2meco")
Maintained by
Chi Liu
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-09-09
Latest Update: 2024-11-19
Description:
Transform output files of some tools to the 'microtable' object of 'microtable' class in 'microeco' package. The 'microtable' class is the basic class in 'microeco' package and is necessary for the downstream microbial community data analysis.
How to cite:
Chi Liu (2021). file2meco: Transform Files to 'microtable' Object with 'microeco' Package. R package version 0.9.1, https://cran.r-project.org/web/packages/file2meco. Accessed 13 Oct. 2026.
Previous versions and publish date:
(2026-07-09 07:38), 0.1.0 (2021-09-09 11:00), 0.2.0 (2021-11-16 06:40), 0.2.1 (2022-01-06 15:30), 0.2.2 (2022-03-23 17:00), 0.2.3 (2022-05-06 11:20), 0.2.4 (2022-05-24 12:40), 0.3.0 (2022-06-07 11:40), 0.4.0 (2022-08-07 11:50), 0.5.0 (2022-11-15 19:40), 0.6.0 (2023-05-05 10:50), 0.7.0 (2023-11-10 05:50), 0.7.1 (2024-03-07 07:20), 0.8.0 (2024-06-30 10:20), 0.9.0 (2024-10-31 07:20)
Other packages that cited file2meco R package
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Other R packages that file2meco depends,
imports, suggests or enhances
Complete documentation for file2meco
Functions, R codes and Examples using
the file2meco R package
Some associated functions: CHOCOPhlAn_taxonomy . MetaCyc_pathway_map . check_match_table . check_sample_table . file2meco . humann2meco . meco2phyloseq . metacyc_pathway_website . mpa2meco . ncyc2meco . ncyc_map . pcyc_map . phyloseq2meco . qiime1meco . qiime2meco . vs2meco .
Some associated R codes: data.R . help.R . humann2meco.R . import.R . mpa2meco.R . ncyc2meco.R . physeq2meco.R . qiime1meco.R . qiime2meco.R . utility.R . vs2meco.R . Full file2meco package functions and examples
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