Other packages > Find by keyword >

fbar  

An Extensible Approach to Flux Balance Analysis
View on CRAN: Click here


Download and install fbar package within the R console
Install from CRAN:
install.packages("fbar")

Install from Github:
library("remotes")
install_github("cran/fbar")

Install by package version:
library("remotes")
install_version("fbar", "0.6.0")



Attach the package and use:
library("fbar")
Maintained by
Max Conway
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-12-20
Latest Update: 2020-09-02
Description:
A toolkit for Flux Balance Analysis and related metabolic modeling techniques. Functions are provided for: parsing models in tabular format, converting parsed metabolic models to input formats for common linear programming solvers, and evaluating and applying gene-protein-reaction mappings. In addition, there are wrappers to parse a model, select a solver, find the metabolic fluxes, and return the results applied to the original model. Compared to other packages in this field, this package puts a much heavier focus on providing reusable components that can be used in the design of new implementation of new techniques, in particular those that involve large parameter sweeps. For a background on the theory, see What is Flux Balance Analysis .
How to cite:
Max Conway (2016). fbar: An Extensible Approach to Flux Balance Analysis. R package version 0.6.0, https://cran.r-project.org/web/packages/fbar. Accessed 21 Nov. 2024.
Previous versions and publish date:
0.1.16 (2016-12-20 02:04), 0.1.23 (2017-01-14 12:46), 0.3.3 (2017-10-18 00:56), 0.3.4 (2017-10-24 16:56), 0.4.3 (2018-04-04 05:38), 0.5.2 (2018-12-03 12:32)
Other packages that cited fbar R package
View fbar citation profile
Other R packages that fbar depends, imports, suggests or enhances
Complete documentation for fbar
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

pkgdepends  
Package Dependency Resolution and Downloads
Find recursive dependencies of 'R' packages from various sources. Solve the dependencies to obtain ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
RcppHNSW  
'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest Neighbors
'Hnswlib' is a C++ library for Approximate Nearest Neighbors. This package provides a minimal R int ...
Download / Learn more Package Citations See dependency  
kgschart  
KGS Rank Graph Parser
Restore underlining numeric data from rating history graph of KGS (an online platform of the game o ...
Download / Learn more Package Citations See dependency  
crossrun  
Joint Distribution of Number of Crossings and Longest Run
Joint distribution of number of crossings and the longest run in a series of independent Bernoulli ...
Download / Learn more Package Citations See dependency  
deductive  
Data Correction and Imputation Using Deductive Methods
Attempt to repair inconsistencies and missing values in data records by using information from vali ...
Download / Learn more Package Citations See dependency  

23,229

R Packages

199,929

Dependencies

62,984

Author Associations

23,230

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA