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famSKATRC
View on CRAN: Click
here
Download and install famSKATRC package within the R console
Install from CRAN:
install.packages("famSKATRC")
Install from Github:
library("remotes")
install_github("cran/famSKATRC")
Install by package version:
library("remotes")
install_version("famSKATRC", "1.1.0")
Attach the package and use:
library("famSKATRC")
Maintained by
Khalid B. Kunji
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
10.32614/CRAN.package.famSKATRC . famSKATRC results . famSKATRC.pdf . famSKATRC_1.1.0.tar.gz . famSKATRC_1.1.0.zip . famSKATRC_1.1.0.zip . famSKATRC_1.1.0.zip . famSKATRC_1.1.0.tgz . famSKATRC_1.1.0.tgz . famSKATRC_1.1.0.tgz . famSKATRC_1.1.0.tgz . famSKATRC archive . https://CRAN.R-project.org/package=famSKATRC .
First Published: 2017-10-12
Latest Update: 2017-11-09
Description:
FamSKAT-RC is a family-based association kernel test for both
rare and common variants. This test is general and several special cases
are known as other methods: famSKAT, which only focuses on rare variants
in family-based data, SKAT, which focuses on rare variants in
population-based data (unrelated individuals), and SKAT-RC, which focuses
on both rare and common variants in population-based data. When one
applies famSKAT-RC and sets the value of phi to 1, famSKAT-RC becomes
famSKAT. When one applies famSKAT-RC and set the value of phi to 1 and the
kinship matrix to the identity matrix, famSKAT-RC becomes SKAT. When one
applies famSKAT-RC and set the kinship matrix (fullkins) to the identity
matrix (and phi is not equal to 1), famSKAT-RC becomes SKAT-RC. We also
include a small sample synthetic pedigree to demonstrate the method with.
For more details see Saad M and Wijsman EM (2014) .
How to cite:
Khalid B. Kunji (2017). famSKATRC: Family Sequence Kernel Association Test for Rare and Common Variants. R package version 1.1.0, https://cran.r-project.org/web/packages/famSKATRC. Accessed 15 May. 2025.
Previous versions and publish date:
1.0.3 (2017-10-12 13:24)
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imports, suggests or enhances
Complete documentation for famSKATRC
Functions, R codes and Examples using
the famSKATRC R package
Some associated functions: famSKATRC-package . famSKAT_RC . process_data . sample.ped.geno .
Some associated R codes: famSKAT_RC.R . onAttach.R . process_data.R . Full famSKATRC package functions and examples
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