Other packages > Find by keyword >

famSKATRC  

Family Sequence Kernel Association Test for Rare and Common Variants
View on CRAN: Click here


Download and install famSKATRC package within the R console
Install from CRAN:
install.packages("famSKATRC")

Install from Github:
library("remotes")
install_github("cran/famSKATRC")

Install by package version:
library("remotes")
install_version("famSKATRC", "1.1.0")



Attach the package and use:
library("famSKATRC")
Maintained by
Khalid B. Kunji
[Scholar Profile | Author Map]
First Published: 2017-10-12
Latest Update: 2017-11-09
Description:
FamSKAT-RC is a family-based association kernel test for both rare and common variants. This test is general and several special cases are known as other methods: famSKAT, which only focuses on rare variants in family-based data, SKAT, which focuses on rare variants in population-based data (unrelated individuals), and SKAT-RC, which focuses on both rare and common variants in population-based data. When one applies famSKAT-RC and sets the value of phi to 1, famSKAT-RC becomes famSKAT. When one applies famSKAT-RC and set the value of phi to 1 and the kinship matrix to the identity matrix, famSKAT-RC becomes SKAT. When one applies famSKAT-RC and set the kinship matrix (fullkins) to the identity matrix (and phi is not equal to 1), famSKAT-RC becomes SKAT-RC. We also include a small sample synthetic pedigree to demonstrate the method with. For more details see Saad M and Wijsman EM (2014) .
How to cite:
Khalid B. Kunji (2017). famSKATRC: Family Sequence Kernel Association Test for Rare and Common Variants. R package version 1.1.0, https://cran.r-project.org/web/packages/famSKATRC. Accessed 15 May. 2025.
Previous versions and publish date:
1.0.3 (2017-10-12 13:24)
Other packages that cited famSKATRC R package
View famSKATRC citation profile
Other R packages that famSKATRC depends, imports, suggests or enhances
Complete documentation for famSKATRC
Functions, R codes and Examples using the famSKATRC R package
Some associated functions: famSKATRC-package . famSKAT_RC . process_data . sample.ped.geno . 
Some associated R codes: famSKAT_RC.R . onAttach.R . process_data.R .  Full famSKATRC package functions and examples
Downloads during the last 30 days
04/1504/1604/1704/1804/1904/2004/2104/2204/2304/2404/2504/2604/2704/2804/2904/3005/0105/0205/0305/0405/0505/0605/0705/0805/0905/1005/1105/1205/1305/14Downloads for famSKATRC05101520253035404550TrendBars

Today's Hot Picks in Authors and Packages

r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
RSQLite  
SQLite Interface for R
Embeds the SQLite database engine in R and provides an interface compliant with the DBI package. Th ...
Download / Learn more Package Citations See dependency  
lubridate  
Make Dealing with Dates a Little Easier
Functions to work with date-times and time-spans: fast and user friendly parsing of date-time data, ...
Download / Learn more Package Citations See dependency  
vietnamcode  
Convert Vietnam Provincial Codes
Converts Vietnam's provinces' names and ID across different formats. Handles diacritics and differen ...
Download / Learn more Package Citations See dependency  
Maintainer: Anh Le (view profile)
olsrr  
Tools for Building OLS Regression Models
Tools designed to make it easier for users, particularly beginner/intermediate R users to build ord ...
Download / Learn more Package Citations See dependency  

24,223

R Packages

207,311

Dependencies

65,402

Author Associations

24,224

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA