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ez.combat  

Easy ComBat Harmonization
View on CRAN: Click here


Download and install ez.combat package within the R console
Install from CRAN:
install.packages("ez.combat")

Install from Github:
library("remotes")
install_github("cran/ez.combat")

Install by package version:
library("remotes")
install_version("ez.combat", "1.0.0")



Attach the package and use:
library("ez.combat")
Maintained by
Timothy Koscik
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-06-07
Latest Update: 2021-06-07
Description:
A dataframe-friendly implementation of ComBat Harmonization which uses an empirical Bayesian framework to remove batch effects. Johnson WE & Li C (2007) "Adjusting batch effects in microarray expression data using empirical Bayes methods." Fortin J-P, Cullen N, Sheline YI, Taylor WD, Aselcioglu I, Cook PA, Adams P, Cooper C, Fava M, McGrath PJ, McInnes M, Phillips ML, Trivedi MH, Weissman MM, & Shinohara RT (2017) "Harmonization of cortical thickness measurements across scanners and sites." Fortin J-P, Parker D, Tun B, Watanabe T, Elliott MA, Ruparel K, Roalf DR, Satterthwaite TD, Gur RC, Gur RE, Schultz RT, Verma R, & Shinohara RT (2017) "Harmonization of multi-site diffusion tensor imaging data."
How to cite:
Timothy Koscik (2021). ez.combat: Easy ComBat Harmonization. R package version 1.0.0, https://cran.r-project.org/web/packages/ez.combat
Previous versions and publish date:
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Other R packages that ez.combat depends, imports, suggests or enhances
Functions, R codes and Examples using the ez.combat R package
Some associated functions: ez.combat . pkg-internal . 
Some associated R codes: aprior.R . bprior.R . ez.combat.R . it.sol.R . postmean.R . postvar.R .  Full ez.combat package functions and examples
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