Other packages > Find by keyword >

exp2flux  

Convert Gene EXPression Data to FBA FLUXes
View on CRAN: Click here


Download and install exp2flux package within the R console
Install from CRAN:
install.packages("exp2flux")

Install from Github:
library("remotes")
install_github("cran/exp2flux")

Install by package version:
library("remotes")
install_version("exp2flux", "0.1")



Attach the package and use:
library("exp2flux")
Maintained by
Daniel Osorio
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-10-11
Latest Update: 2022-11-20
Description:
For a given metabolic model with well formed Gene-Protein-Reaction GPR associations and an expressionSet with their associated gene expression values this package converts gene expression values to the FBA boundaries for each reaction based in the boolean rules described in its associated GPR.
How to cite:
Daniel Osorio (2016). exp2flux: Convert Gene EXPression Data to FBA FLUXes. R package version 0.1, https://cran.r-project.org/web/packages/exp2flux. Accessed 21 Feb. 2025.
Previous versions and publish date:
0.1 (2016-10-11 12:42)
Other packages that cited exp2flux R package
View exp2flux citation profile
Other R packages that exp2flux depends, imports, suggests or enhances
Functions, R codes and Examples using the exp2flux R package
Full exp2flux package functions and examples
Downloads during the last 30 days
01/2201/2901/3002/0102/0502/0802/1002/1102/1202/1302/1502/1702/19Downloads for exp2flux0.811.21.41.61.822.22.42.62.833.2TrendBars
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

gorpiper  
GORpipe Tool for R
R library for executing GOR queries using local GORpipe. ...
Download / Learn more Package Citations See dependency  
PCLassoReg  
Group Regression Models for Risk Protein Complex Identification
Two protein complex-based group regression models (PCLasso and PCLasso2) for risk protein complex id ...
Download / Learn more Package Citations See dependency  
GEint  
Misspecified Models for Gene-Environment Interaction
The first major functionality is to compute the bias in misspecified linear gene-environment interac ...
Download / Learn more Package Citations See dependency  
divDyn  
Diversity Dynamics using Fossil Sampling Data
Functions to describe sampling and diversity dynamics of fossil occurrence datasets (e.g. from the P ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
BTdecayLasso  
Bradley-Terry Model with Exponential Time Decayed Log-Likelihood and Adaptive Lasso
We utilize the Bradley-Terry Model to estimate the abilities of teams using paired comparison data. ...
Download / Learn more Package Citations See dependency  

23,712

R Packages

205,795

Dependencies

64,332

Author Associations

23,631

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA