Other packages > Find by keyword >

exDE  

Extensible Differential Equations for Mosquito-Borne Pathogen Modeling
View on CRAN: Click here


Download and install exDE package within the R console
Install from CRAN:
install.packages("exDE")

Install from Github:
library("remotes")
install_github("cran/exDE")

Install by package version:
library("remotes")
install_version("exDE", "1.0.0")



Attach the package and use:
library("exDE")
Maintained by
Sean L. Wu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-11-18
Latest Update: 2024-01-11
Description:
Provides tools to set up modular ordinary and delay differential equation models for mosquito-borne pathogens, focusing on malaria. Modular design is achieved by S3 dispatch on parameter lists for each component which is used to compute the full set of differential equations which may be solved using any of the packages for numerical simulation of differential equations in R. The methods implemented by this package are described in Wu et al. (2022) .
How to cite:
Sean L. Wu (2022). exDE: Extensible Differential Equations for Mosquito-Borne Pathogen Modeling. R package version 1.0.0, https://cran.r-project.org/web/packages/exDE
Previous versions and publish date:
1.0.0 (2022-11-18 11:00)
Other packages that cited exDE R package
View exDE citation profile
Other R packages that exDE depends, imports, suggests or enhances
Functions, R codes and Examples using the exDE R package
Some associated functions: ExogenousForcing.null . ExogenousForcing . F_EIR.SIP . F_EIR.SIS . F_EIR.hMoI . F_EIR . F_Z.RM . F_Z . F_Z_lag.RM . F_Z_lag . F_alpha.basic . F_alpha . F_alpha.trace . F_beta.SIP . F_beta.SIS . F_beta.hMoI . F_beta . F_beta_lag.SIP . F_beta_lag.SIS . F_beta_lag.hMoI . F_beta_lag . F_eggs.RM . F_eggs . F_kappa.RM_dde . F_kappa.RM_ode . F_kappa . F_tau.RM . F_tau . F_x.SIP . F_x.SIS . F_x.hMoI . F_x . F_x_lag.SIP . F_x_lag.SIS . F_x_lag.hMoI . F_x_lag . MosquitoBehavior.RM . MosquitoBehavior . VectorControl.lemenach . VectorControl.null . VectorControl . approx_equal . dLdt.basic . dLdt . dLdt.trace . dMYZdt.RM_dde . dMYZdt.RM_ode . dMYZdt . dXdt.SIP . dXdt.SIS . dXdt.hMoI . dXdt . diag_inverse . make_Omega . make_index_L.basic . make_index_L . make_index_L.trace . make_index_MYZ.RM . make_index_MYZ . make_index_X.SIP . make_index_X.SIS . make_index_X.hMoI . make_index_X . make_indices . make_parameters_L_basic . make_parameters_L_trace . make_parameters_MYZ_RM_dde . make_parameters_MYZ_RM_ode . make_parameters_X_SIP . make_parameters_X_SIS . make_parameters_X_hMoI . make_parameters_exogenous_null . make_parameters_vc_lemenach . make_parameters_vc_null . metric_calD . metric_calR . metric_calV . metric_calZ . xDE_diffeqn . xDE_diffeqn_mosy . 
Some associated R codes: adult-RM.R . adult-interface.R . aquatic-basic.R . aquatic-interface.R . aquatic-trace.R . diffeqn.R . exogeneous-null.R . exogeneous.R . human-SIP.R . human-SIS.R . human-hMoI.R . human-interface.R . metrics.R . utils.R . vc-lemenach.R . vc-null.R . vc.R .  Full exDE package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
mistral  
Methods in Structural Reliability
Various reliability analysis methods for rare event inference (computing failure probability and qua ...
Download / Learn more Package Citations See dependency  
steepness  
Testing Steepness of Dominance Hierarchies
The steepness package computes steepness as a property of dominance hierarchies. Steepness is define ...
Download / Learn more Package Citations See dependency  
critpath  
Setting the Critical Path in Project Management
Solving the problem of project management using CPM (Critical Path Method), PERT (Program Evaluation ...
Download / Learn more Package Citations See dependency  
rdbnomics  
Download DBnomics Data
R access to hundreds of millions data series from DBnomics API (). ...
Download / Learn more Package Citations See dependency  
ftaproxim  
Fault Tree Analysis Based on Proxel Simulation
Calculation and plotting of instantaneous unavailabilities of basic events along with the top event ...
Download / Learn more Package Citations See dependency  

22,114

R Packages

188,080

Dependencies

55,244

Author Associations

22,115

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net. Contact Us / Suggestions / Concerns