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entropart  

Entropy Partitioning to Measure Diversity
View on CRAN: Click here


Download and install entropart package within the R console
Install from CRAN:
install.packages("entropart")

Install from Github:
library("remotes")
install_github("cran/entropart")

Install by package version:
library("remotes")
install_version("entropart", "1.6-13")



Attach the package and use:
library("entropart")
Maintained by
Eric Marcon
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2013-09-10
Latest Update: 2023-09-26
Description:
Measurement and partitioning of diversity, based on Tsallis entropy, following Marcon and Herault (2015) . 'entropart' provides functions to calculate alpha, beta and gamma diversity of communities, including phylogenetic and functional diversity. Estimation-bias corrections are available.
How to cite:
Eric Marcon (2013). entropart: Entropy Partitioning to Measure Diversity. R package version 1.6-13, https://cran.r-project.org/web/packages/entropart
Previous versions and publish date:
1.1.1 (2013-09-10 17:21), 1.1.3 (2014-03-22 16:53), 1.2.0 (2014-05-17 07:40), 1.2.1 (2014-11-13 08:08), 1.3.1 (2015-09-04 21:49), 1.3.2 (2015-09-05 22:16), 1.3.3 (2015-09-08 15:59), 1.4-3 (2015-12-07 00:08), 1.4-4 (2016-01-13 09:52), 1.4-5 (2016-02-17 22:03), 1.4-6 (2016-12-09 08:58), 1.4-7 (2017-03-29 23:48), 1.4-8 (2017-11-23 01:40), 1.4.1 (2015-09-29 01:07), 1.5-3 (2018-02-05 23:20), 1.6-1 (2019-04-11 22:32), 1.6-3 (2020-01-09 00:01), 1.6-4 (2020-01-22 16:40), 1.6-6 (2020-11-03 08:00), 1.6-7 (2021-04-16 21:10), 1.6-8 (2021-06-04 14:00), 1.6-9 (2022-03-05 16:40), 1.6-10 (2022-04-03 00:50), 1.6-11 (2022-07-11 10:20), 1.6-12 (2023-05-31 19:50)
Other packages that cited entropart R package
View entropart citation profile
Other R packages that entropart depends, imports, suggests or enhances
Functions, R codes and Examples using the entropart R package
Some associated functions: AbdFreqCount . Accumulation . AllenH . AlphaDiversity . AlphaEntropy . ArgumentOriginalName . BetaDiversity . BetaEntropy . ChaoPD . CheckentropartArguments . CommunityProfile . Coverage . DivEst . DivPart . DivProfile . Diversity . Dqz . EightSpAbundance . EightSpTree . Enq . EntropyCI . GammaDiversity . GammaEntropy . GenSimpson . Hqz . HqzBeta . Hurlbert . KLq . MCdiversity . MCentropy . MergeMC . MetaCommunity . Optimal.Similarity . PDFD . PPtree . Paracou618.Functional . Paracou618.MC . Paracou618.Taxonomy . Paracou618.dist . PhyloApply . PhyloBetaEntropy . PhyloDiversity . PhyloEntropy . PhyloValue . Preprocess.MC . Preprocess.Tree . RAC . Rao . Richness . Shannon . ShannonBeta . SimTest . Simpson . SimpsonBeta . SpeciesDistribution . Tsallis . TsallisBeta . entropart-package . expq . lnq . mergeandlabel . rCommunity . reexports . 
Some associated R codes: AbdFreqCount.R . Accumulation.R . AllenH.R . AlphaDiversity.R . AlphaEntropy.R . ArgumentOriginalName.R . BetaDiversity.R . BetaEntropy.R . CEnvelope.R . ChaoPD.R . CheckentropartArguments.R . CommunityProfile.R . Coverage.R . DivEst.R . DivPart.R . DivProfile.R . Diversity.R . Dqz.R . Enq.R . EntropyCI.R . GammaDiversity.R . GammaEntropy.R . GenSimpson.R . GenSimpsonD.R . Hqz.R . HqzBeta.R . Hurlbert.R . HurlbertD.R . KLq.R . MCdiversity.R . MCentropy.R . MergeC.R . MergeMC.R . MetaCommunity.R . Optimal.Similarity.R . PDFD.R . PPtree.R . PhyloApply.R . PhyloBetaEntropy.R . PhyloDiversity.R . PhyloEntropy.R . PhyloValue.R . Preprocess.MC.R . Preprocess.Tree.R . Rao.R . Richness.R . Shannon.R . ShannonBeta.R . ShuffleMC.R . SimTest.R . Simpson.R . SimpsonBeta.R . SpeciesDistribution.R . Tsallis.R . TsallisBeta.R . expq.R . lnq.R . mergeandlabel.R . rCommunity.R .  Full entropart package functions and examples
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