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ecostate  

State-Space Mass-Balance Model for Marine Ecosystems
View on CRAN: Click here


Download and install ecostate package within the R console
Install from CRAN:
install.packages("ecostate")

Install from Github:
library("remotes")
install_github("cran/ecostate")

Install by package version:
library("remotes")
install_version("ecostate", "0.3.0")



Attach the package and use:
library("ecostate")
Maintained by
James T. Thorson
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-11-25
Latest Update: 2024-11-25
Description:
Fits a state-space mass-balance model for marine ecosystems, which implements dynamics derived from 'Ecopath with Ecosim' <https://ecopath.org/> while fitting to time-series of fishery catch, biomass indices, age-composition samples, and weight-at-age data. Package 'ecostate' fits biological parameters (e.g., equilibrium mass) and measurement parameters (e.g., catchability coefficients) jointly with residual variation in process errors, and can include Bayesian priors for parameters.
How to cite:
James T. Thorson (2024). ecostate: State-Space Mass-Balance Model for Marine Ecosystems. R package version 0.3.0, https://cran.r-project.org/web/packages/ecostate. Accessed 27 Jun. 2026.
Previous versions and publish date:
0.2.0 (2024-11-25 12:50)
Other packages that cited ecostate R package
View ecostate citation profile
Other R packages that ecostate depends, imports, suggests or enhances
Complete documentation for ecostate
Functions, R codes and Examples using the ecostate R package
Full ecostate package functions and examples
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