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ecodive  

Parallel and Memory-Efficient Ecological Diversity Metrics
View on CRAN: Click here


Download and install ecodive package within the R console
Install from CRAN:
install.packages("ecodive")

Install from Github:
library("remotes")
install_github("cran/ecodive")

Install by package version:
library("remotes")
install_version("ecodive", "2.2.2")



Attach the package and use:
library("ecodive")
Maintained by
Daniel P. Smith
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-08-22
Latest Update: 2025-08-22
Description:
Computes alpha and beta diversity metrics using concurrent 'C' threads. Metrics include 'UniFrac', Faith's phylogenetic diversity, Bray-Curtis dissimilarity, Shannon diversity index, and many others. Also parses newick trees into 'phylo' objects and rarefies feature tables.
How to cite:
Daniel P. Smith (2025). ecodive: Parallel and Memory-Efficient Ecological Diversity Metrics. R package version 2.2.2, https://cran.r-project.org/web/packages/ecodive. Accessed 05 Jun. 2026.
Previous versions and publish date:
1.0.0 (2025-08-22 19:40), 2.0.0 (2025-09-21 21:50), 2.1.0 (2025-09-26 09:40), 2.2.0 (2025-12-04 01:40), 2.2.1 (2025-12-12 18:40), 2.2.2 (2026-01-16 16:10)
Other packages that cited ecodive R package
View ecodive citation profile
Other R packages that ecodive depends, imports, suggests or enhances
Complete documentation for ecodive
Functions, R codes and Examples using the ecodive R package
Full ecodive package functions and examples
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