Other packages > Find by keyword >

eCV  

Enhanced Coefficient of Variation and IDR Extensions for Reproducibility Assessment
View on CRAN: Click here


Download and install eCV package within the R console
Install from CRAN:
install.packages("eCV")

Install from Github:
library("remotes")
install_github("cran/eCV")

Install by package version:
library("remotes")
install_version("eCV", "0.0.2")



Attach the package and use:
library("eCV")
Maintained by
Agustin Gonzalez-Reymundez
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-01-08
Latest Update: 2024-01-19
Description:
Reproducibility assessment is essential in extracting reliable scientific insights from high-throughput experiments. While the Irreproducibility Discovery Rate (IDR) method has been instrumental in assessing reproducibility, its standard implementation is constrained to handling only two replicates. Package 'eCV' introduces an enhanced Coefficient of Variation (eCV) metric to assess the likelihood of omic features being reproducible. Additionally, it offers alternatives to the Irreproducible Discovery Rate (IDR) calculations for multi-replicate experiments. These tools are valuable for analyzing high-throughput data in genomics and other omics fields. The methods implemented in 'eCV' are described in Gonzalez-Reymundez et al., (2023) .
How to cite:
Agustin Gonzalez-Reymundez (2024). eCV: Enhanced Coefficient of Variation and IDR Extensions for Reproducibility Assessment. R package version 0.0.2, https://cran.r-project.org/web/packages/eCV. Accessed 25 Jun. 2026.
Previous versions and publish date:
0.0.1 (2024-01-08 11:30)
Other packages that cited eCV R package
View eCV citation profile
Other R packages that eCV depends, imports, suggests or enhances
Complete documentation for eCV
Functions, R codes and Examples using the eCV R package
Some associated functions: eCV . gIDR . mIDR . mrep_assessment . simulate_data . 
Some associated R codes: auxiliary_functions.R . eCV.R . eCV_jumpstart.R . gIDR.R . mIDR.R . mrep_assessment.R . simulate_data.R .  Full eCV package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

airGRiwrm  
'airGR' Integrated Water Resource Management
Semi-distributed Precipitation-Runoff Modelling based on 'airGR' package models integrating human i ...
Download / Learn more Package Citations See dependency  
foster  
Forest Structure Extrapolation with R
Set of tools to streamline the modeling of the relationship betweensatellite imagery time series or ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
edeaR  
Exploratory and Descriptive Event-Based Data Analysis
Exploratory and descriptive analysis of event based data. Provides methods for describing and select ...
Download / Learn more Package Citations See dependency  
sitmo  
Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files
Provided within are two high quality and fast PPRNGs that may be used in an 'OpenMP' parallel enviro ...
Download / Learn more Package Citations See dependency  

27,535

R Packages

236,180

Dependencies

73,223

Author Associations

27,536

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA