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drugsens  

Automated Analysis of 'QuPath' Output Data and Metadata Extraction
View on CRAN: Click here


Download and install drugsens package within the R console
Install from CRAN:
install.packages("drugsens")

Install from Github:
library("remotes")
install_github("cran/drugsens")

Install by package version:
library("remotes")
install_version("drugsens", "0.1.0")



Attach the package and use:
library("drugsens")
Maintained by
Flavio Lombardo
[Scholar Profile | Author Map]
First Published: 2025-01-16
Latest Update: 2025-01-16
Description:
A comprehensive toolkit for analyzing microscopy data output from 'QuPath' software. Provides functionality for automated data processing, metadata extraction, and statistical analysis of imaging results. The methodology implemented in this package is based on Labrosse et al. (2024) <doi:10.1016/j.xpro.2024.103274> "Protocol for quantifying drug sensitivity in 3D patient-derived ovarian cancer models", which describes the complete workflow for drug sensitivity analysis in patient-derived cancer models.
How to cite:
Flavio Lombardo (2025). drugsens: Automated Analysis of 'QuPath' Output Data and Metadata Extraction. R package version 0.1.0, https://cran.r-project.org/web/packages/drugsens. Accessed 04 Apr. 2025.
Previous versions and publish date:
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Complete documentation for drugsens
Functions, R codes and Examples using the drugsens R package
Full drugsens package functions and examples
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