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diverge
View on CRAN: Click
here
Download and install diverge package within the R console
Install from CRAN:
install.packages("diverge")
Install from Github:
library("remotes")
install_github("cran/diverge")
Install by package version:
library("remotes")
install_version("diverge", "2.0.6")
Attach the package and use:
library("diverge")
Maintained by
Sean A. S. Anderson
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
10.32614/CRAN.package.diverge . diverge results . diverge.pdf . diverge_2.0.6.tar.gz . diverge_2.0.6.zip . diverge_2.0.6.zip . diverge_2.0.6.zip . diverge_2.0.6.tgz . diverge_2.0.6.tgz . diverge_2.0.6.tgz . diverge_2.0.6.tgz . diverge_2.0.6.tgz . diverge_2.0.6.tgz . diverge archive . https://CRAN.R-project.org/package=diverge .
First Published: 2020-03-03
Latest Update: 2022-12-15
Description:
Compares the fit of alternative models of continuous trait differentiation between sister species and other paired lineages. Differences in trait means between two lineages arise as they diverge from a common ancestor, and alternative processes of evolutionary divergence are expected to leave unique signatures in the distribution of trait differentiation in datasets comprised of many lineage pairs. Models include approximations of divergent selection, drift, and stabilizing selection. A variety of model extensions facilitate the testing of process-to-pattern hypotheses. Users supply trait data and divergence times for each lineage pair. The fit of alternative models is compared in a likelihood framework.
How to cite:
Sean A. S. Anderson (2020). diverge: Evolutionary Trait Divergence Between Sister Species and Other Paired Lineages. R package version 2.0.6, https://cran.r-project.org/web/packages/diverge. Accessed 29 Mar. 2025.
Previous versions and publish date:
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Complete documentation for diverge
Functions, R codes and Examples using
the diverge R package
Some associated functions: bootstrap_ci . diverge-data . diverge-package . expected_val . extract_sisters . find_mle . likelihood_func . model_error_rate . model_generator . model_select . param_grid . random_walks . re_estimator . simulate_div .
Some associated R codes: bootstrap_ci.R . col_names.R . expected_val.R . extract_sisters.R . find_mle.R . likelihood_func.R . model_error_rate.R . model_generator.R . model_select.R . param_grid.R . random_walks.R . re_estimator.R . simulate_div.R . Full diverge package functions and examples
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