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divDyn
View on CRAN: Click
here
Download and install divDyn package within the R console
Install from CRAN:
install.packages("divDyn")
Install from Github:
library("remotes")
install_github("cran/divDyn")
Install by package version:
library("remotes")
install_version("divDyn", "0.8.2")
Attach the package and use:
library("divDyn")
Maintained by
Adam T. Kocsis
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-10-08
Latest Update: 2022-09-05
Description:
Functions to describe sampling and diversity dynamics of fossil occurrence datasets (e.g. from the Paleobiology Database). The package includes methods to calculate range- and occurrence-based metrics of taxonomic richness, extinction and origination rates, along with traditional sampling measures. A powerful subsampling tool is also included that implements frequently used sampling standardization methods in a multiple bin-framework. The plotting of time series and the occurrence data can be simplified by the functions incorporated in the package, as well as other calculations, such as environmental affinities and extinction selectivity testing. Details can be found in: Kocsis, A.T.; Reddin, C.J.; Alroy, J. and Kiessling, W. (2019) .
How to cite:
Adam T. Kocsis (2018). divDyn: Diversity Dynamics using Fossil Sampling Data. R package version 0.8.2, https://cran.r-project.org/web/packages/divDyn
Previous versions and publish date:
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imports, suggests or enhances
Functions, R codes and Examples using
the divDyn R package
Some associated functions: affinity . binstat . categorize . cleansp . collapse . corals . divDyn . fadlad . fill . georange . indices . keys . matchtime . modeltab . omit . parts . ranges . ratesplit . repmatch . shades . singletons . slice . stages . stages2018 . stratkeys . streaklog . subsample . subtrial . sumstat . survivors . tabinate . tens . tsbars . tsplot .
Some associated R codes: RcppExports.R . affinity.R . cleaning.R . data.R . fadLad.R . georange.R . indices.R . inter.R . map.R . modeltab.R . plotting.R . rateSplit.R . repmatch.R . sampstat.R . singletons.R . slice.R . subsample.R . subtrials.R . tabinate.R . utility.R . zzz.R . Full divDyn package functions and examples
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