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directPA
View on CRAN: Click
here
Download and install directPA package within the R console
Install from CRAN:
install.packages("directPA")
Install from Github:
library("remotes")
install_github("cran/directPA")
Install by package version:
library("remotes")
install_version("directPA", "1.5.1")
Attach the package and use:
library("directPA")
Maintained by
Pengyi Yang
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2013-10-22
Latest Update: 2020-11-16
Description:
Direction analysis is a set of tools designed to identify
combinatorial effects of multiple treatments/conditions on pathways
and kinases profiled by microarray, RNA-seq, proteomics, or phosphoproteomics
data. See Yang P et al (2014) ; and Yang P et al. (2016) .
How to cite:
Pengyi Yang (2013). directPA: Direction Analysis for Pathways and Kinases. R package version 1.5.1, https://cran.r-project.org/web/packages/directPA. Accessed 22 Dec. 2024.
Previous versions and publish date:
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Other R packages that directPA depends,
imports, suggests or enhances
Complete documentation for directPA
Functions, R codes and Examples using
the directPA R package
Some associated functions: HEK . PM . Pathways.KEGG . Pathways.reactome . PhosphoELM.human . PhosphoELM.mouse . PhosphoSite.human . PhosphoSite.mouse . directExplorer2d . directPA-package . directPA . geneStats . kinasePA . pathwayStats . perturbPlot2d . perturbPlot3d . rotate2d . rotate3d .
Some associated R codes: directExplorer2d.R . directPA.R . geneStats.R . kinasePA.R . pathwayStats.R . perturbPlot2d.R . perturbPlot3d.R . rotate2d.R . rotate3d.R . Full directPA package functions and examples
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