Other packages > Find by keyword >

digitalDLSorteR  

Deconvolution of Bulk RNA-Seq Data Based on Deep Learning
View on CRAN: Click here


Download and install digitalDLSorteR package within the R console
Install from CRAN:
install.packages("digitalDLSorteR")

Install from Github:
library("remotes")
install_github("cran/digitalDLSorteR")

Install by package version:
library("remotes")
install_version("digitalDLSorteR", "1.1.0")



Attach the package and use:
library("digitalDLSorteR")
Maintained by
Diego Mañanes
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-10-08
Latest Update:
Description:
Deconvolution of bulk RNA-Seq data using context-specific deconvolution models based on Deep Neural Networks using scRNA-Seq data as input. These models are able to make accurate estimates of the cell composition of bulk RNA-Seq samples from the same context using the advances provided by Deep Learning and the meaningful information provided by scRNA-Seq data. See Torroja and Sanchez-Cabo (2019) for more details.
How to cite:
Diego Mañanes (2021). digitalDLSorteR: Deconvolution of Bulk RNA-Seq Data Based on Deep Learning. R package version 1.1.0, https://cran.r-project.org/web/packages/digitalDLSorteR. Accessed 08 Oct. 2026.
Previous versions and publish date:
(2026-07-09 07:32), 0.1.0 (2021-10-08 11:50), 0.1.1 (2021-10-20 01:00), 0.2.0 (2022-03-10 11:10), 0.3.0 (2022-05-24 10:30), 0.3.1 (2022-10-05 10:40), 1.0.1 (2024-02-07 11:30), 1.1.0 (2024-09-13 17:20)
Other packages that cited digitalDLSorteR R package
View digitalDLSorteR citation profile
Other R packages that digitalDLSorteR depends, imports, suggests or enhances
Complete documentation for digitalDLSorteR
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

dineR  
Differential Network Estimation in R
An efficient and convenient set of functions to perform differential network estimation through the ...
Download / Learn more Package Citations See dependency  
colorfindr  
Extract Colors from Windows BMP, JPEG, PNG, TIFF, and SVG Format Images
Extracts colors from various image types, returns customized reports and plots treemaps and 3D scat ...
Download / Learn more Package Citations See dependency  
climwin  
Climate Window Analysis
Contains functions to detect and visualise periods of climate sensitivity (climate windows) for a g ...
Download / Learn more Package Citations See dependency  
abc.data  
Data Only: Tools for Approximate Bayesian Computation (ABC)
Contains data which are used by functions of the 'abc' package. ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
metafor  
Meta-Analysis Package for R
A comprehensive collection of functions for conducting meta-analyses in R. The package includes func ...
Download / Learn more Package Citations See dependency  

28,905

R Packages

247,686

Dependencies

76,495

Author Associations

28,906

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA