Other packages > Find by keyword >

difconet  

Differential Coexpressed Networks
View on CRAN: Click here


Download and install difconet package within the R console
Install from CRAN:
install.packages("difconet")

Install from Github:
library("remotes")
install_github("cran/difconet")

Install by package version:
library("remotes")
install_version("difconet", "1.0-4")



Attach the package and use:
library("difconet")
Maintained by
Victor Trevino
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-05-31
Latest Update: 2017-05-31
Description:
Estimation of DIFferential COexpressed NETworks using diverse and user metrics. This package is basically used for three functions related to the estimation of differential coexpression. First, to estimate differential coexpression where the coexpression is estimated, by default, by Spearman correlation. For this, a metric to compare two correlation distributions is needed. The package includes 6 metrics. Some of them needs a threshold. A new metric can also be specified as a user function with specific parameters (see difconet.run). The significance is be estimated by permutations. Second, to generate datasets with controlled differential correlation data. This is done by either adding noise, or adding specific correlation structure. Third, to show the results of differential correlation analyses. Please see for further information.
How to cite:
Victor Trevino (2017). difconet: Differential Coexpressed Networks. R package version 1.0-4, https://cran.r-project.org/web/packages/difconet. Accessed 04 Jun. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited difconet R package
View difconet citation profile
Other R packages that difconet depends, imports, suggests or enhances
Complete documentation for difconet
Functions, R codes and Examples using the difconet R package
Some associated functions: difconet.build.controlled.dataset . difconet.noise.inspection . difconet.plot.gene.correlations . difconet.plot.histograms.heatmap2 . difconet.run . 
Some associated R codes: difconet.R .  Full difconet package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

murphydiagram  
Murphy Diagrams for Forecast Comparisons
Data and code for the paper by Ehm, Gneiting, Jordan and Krueger ('Of Quantiles and Expectiles: Con ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
phers  
Calculate Phenotype Risk Scores
Use phenotype risk scores based on linked clinical and genetic data to study Mendelian disease and ...
Download / Learn more Package Citations See dependency  
crplyr  
A 'dplyr' Interface for Crunch
In order to facilitate analysis of datasets hosted on the Crunch data platform ...
Download / Learn more Package Citations See dependency  
golem  
A Framework for Robust Shiny Applications
An opinionated framework for building a production-ready 'Shiny' application. This package contains ...
Download / Learn more Package Citations See dependency  
shinybusy  
Busy Indicators and Notifications for 'Shiny' Applications
Add indicators (spinner, progress bar, gif) in your 'shiny' applications to show the user that the ...
Download / Learn more Package Citations See dependency  

27,268

R Packages

233,548

Dependencies

72,590

Author Associations

27,205

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA