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diathor
View on CRAN: Click
here
Download and install diathor package within the R console
Install from CRAN:
install.packages("diathor")
Install from Github:
library("remotes")
install_github("cran/diathor") Install by package version:
library("remotes")
install_version("diathor", "0.1.5") Attach the package and use:
library("diathor")
Maintained by
Joaquin Cochero
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-11-26
Latest Update: 2024-12-20
Description:
Calculates ecological information and biotic indices for diatoms in a sample.
It includes number/shape of chloroplasts diversity indices, size classes, ecological guilds, and multiple biotic indices.
It outputs both a dataframe with all the results and plots of all the obtained data in a defined output folder.
Sample data was taken from Nicolosi Gelis, Cochero & G
How to cite:
Joaquin Cochero (2020). diathor: Calculate Ecological Information and Diatom Based Indices. R package version 0.1.5, https://cran.r-project.org/web/packages/diathor. Accessed 02 Nov. 2026.
Previous versions and publish date:
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imports, suggests or enhances
Complete documentation for diathor
Functions, R codes and Examples using
the diathor R package
Some associated functions: cemfgs_rb . dbc_offline . des . diaThor . diaThorAll . diat_cemfgs_rb . diat_checkName . diat_des . diat_disp . diat_diversity . diat_epid . diat_getDiatBarcode . diat_guilds . diat_idap . diat_idch . diat_idp . diat_ilm . diat_ips . diat_loadData . diat_lobo . diat_morpho . diat_pbidw . diat_sampleData . diat_size . diat_sla . diat_spear . diat_taxaList . diat_tdi . diat_vandam . disp . epid . idap . idch . idp . ilm . ips . lobo . pbidw . sla . spear . taxaList . tdi .
Some associated R codes: data.R . diaThor.R . diat_cemfgs_rb.R . diat_checkName.R . diat_des.R . diat_disp.R . diat_diversity.R . diat_epid.R . diat_getDiatBarcode.R . diat_guilds.R . diat_idap.R . diat_idch.R . diat_idp.R . diat_ilm.R . diat_ips.R . diat_loadData.R . diat_lobo.R . diat_morpho.R . diat_pbidw.R . diat_size.R . diat_sla.R . diat_spear.R . diat_taxaList.R . diat_tdi.R . diat_vandam.R . diathorAll.R . Full diathor package functions and examples
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