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diagFDR  

Verifiable FDR Diagnostics for Proteomics
View on CRAN: Click here


Download and install diagFDR package within the R console
Install from CRAN:
install.packages("diagFDR")

Install from Github:
library("remotes")
install_github("cran/diagFDR")

Install by package version:
library("remotes")
install_version("diagFDR", "0.1.0")



Attach the package and use:
library("diagFDR")
Maintained by
Quentin Giai Gianetto
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-05-06
Latest Update: 2026-05-06
Description:
Provides methods to compute verifiable false discovery rate (FDR) diagnostic checks for workflows based on target-decoy competition and related confidence measures. Implements calibration, stability and tail diagnostics, including tail support, threshold elasticity, posterior error probability (PEP) reliability, and equal-chance checks.
How to cite:
Quentin Giai Gianetto (2026). diagFDR: Verifiable FDR Diagnostics for Proteomics. R package version 0.1.0, https://cran.r-project.org/web/packages/diagFDR. Accessed 07 Aug. 2026.
Previous versions and publish date:
(2026-07-09 07:31), 0.1.0 (2026-04-13 16:20)
Other packages that cited diagFDR R package
View diagFDR citation profile
Other R packages that diagFDR depends, imports, suggests or enhances
Complete documentation for diagFDR
Functions, R codes and Examples using the diagFDR R package
Full diagFDR package functions and examples
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