Other packages > Find by keyword >

dependentsimr  

Simulate Omics-Scale Data with Dependency
View on CRAN: Click here


Download and install dependentsimr package within the R console
Install from CRAN:
install.packages("dependentsimr")

Install from Github:
library("remotes")
install_github("cran/dependentsimr")

Install by package version:
library("remotes")
install_version("dependentsimr", "1.0.0.0")



Attach the package and use:
library("dependentsimr")
Maintained by
Thomas Brooks
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-07-23
Latest Update: 2025-07-23
Description:
Using a Gaussian copula approach, this package generates simulated data mimicking a target real dataset. It supports normal, Poisson, empirical, and 'DESeq2' (negative binomial with size factors) marginal distributions. It uses an low-rank plus diagonal covariance matrix to efficiently generate omics-scale data. Methods are described in: Yang, Grant, and Brooks (2025) <doi:10.1101/2025.01.31.634335>.
How to cite:
Thomas Brooks (2025). dependentsimr: Simulate Omics-Scale Data with Dependency. R package version 1.0.0.0, https://cran.r-project.org/web/packages/dependentsimr. Accessed 10 Mar. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited dependentsimr R package
View dependentsimr citation profile
Other R packages that dependentsimr depends, imports, suggests or enhances
Complete documentation for dependentsimr
Functions, R codes and Examples using the dependentsimr R package
Full dependentsimr package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

plyr  
Tools for Splitting, Applying and Combining Data
A set of tools that solves a common set of problems: you need to break a big problem down into mana ...
Download / Learn more Package Citations See dependency  
envirem  
Generation of ENVIREM Variables
Generation of bioclimatic rasters that are complementary to the typical 19 bioclim variables. ...
Download / Learn more Package Citations See dependency  
gena  
Genetic Algorithm and Particle Swarm Optimization
Implements genetic algorithm and particle swarm algorithm for real-valued functions. Various modific ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  

26,293

R Packages

225,784

Dependencies

70,376

Author Associations

26,294

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA