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deltaccd  

Quantify Rhythmic Gene Co-Expression Relative to a Reference
View on CRAN: Click here


Download and install deltaccd package within the R console
Install from CRAN:
install.packages("deltaccd")

Install from Github:
library("remotes")
install_github("cran/deltaccd")

Install by package version:
library("remotes")
install_version("deltaccd", "1.0.2")



Attach the package and use:
library("deltaccd")
Maintained by
Jake Hughey
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-02-11
Latest Update: 2022-02-11
Description:
Infer progression of circadian rhythms in transcriptome data in which samples are not labeled with time of day and coverage of the circadian cycle may be incomplete. See Shilts et al. (2018) .
How to cite:
Jake Hughey (2022). deltaccd: Quantify Rhythmic Gene Co-Expression Relative to a Reference. R package version 1.0.2, https://cran.r-project.org/web/packages/deltaccd. Accessed 21 Nov. 2024.
Previous versions and publish date:
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Complete documentation for deltaccd
Functions, R codes and Examples using the deltaccd R package
Some associated functions: GSE19188 . calcCCD . calcDeltaCCD . getRefCor . plotHeatmap . plotRefHeatmap . 
Some associated R codes: deltaccd.R . deltaccd_plot.R . deltaccd_utils.R .  Full deltaccd package functions and examples
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