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decode  

Differential Co-Expression and Differential Expression Analysis
View on CRAN: Click here


Download and install decode package within the R console
Install from CRAN:
install.packages("decode")

Install from Github:
library("remotes")
install_github("cran/decode")

Install by package version:
library("remotes")
install_version("decode", "1.2")



Attach the package and use:
library("decode")
Maintained by
Thomas Lui
[Scholar Profile | Author Map]
First Published: 2015-01-28
Latest Update: 2015-07-14
Description:
Integrated differential expression (DE) and differential co-expression (DC) analysis on gene expression data based on DECODE (DifferEntial CO-expression and Differential Expression) algorithm.
How to cite:
Thomas Lui (2015). decode: Differential Co-Expression and Differential Expression Analysis. R package version 1.2, https://cran.r-project.org/web/packages/decode. Accessed 06 May. 2025.
Previous versions and publish date:
1.0 (2015-01-28 07:41), 1.1 (2015-03-18 07:02)
Other packages that cited decode R package
View decode citation profile
Other R packages that decode depends, imports, suggests or enhances
Complete documentation for decode
Functions, R codes and Examples using the decode R package
Some associated functions: getAssoGeneSetPValue . getBestAssociatedGeneSet . getBonferroniPValue . getDE_DC_OptimalThreshold . getFDR . getPartitionIndex . getPathway . openFileToWrite . runDecode . sumResult_MinGain . 
Some associated R codes: Full decode package functions and examples
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