Other packages > Find by keyword >

cytometree  

Automated Cytometry Gating and Annotation
View on CRAN: Click here


Download and install cytometree package within the R console
Install from CRAN:
install.packages("cytometree")

Install from Github:
library("remotes")
install_github("cran/cytometree")

Install by package version:
library("remotes")
install_version("cytometree", "2.0.2")



Attach the package and use:
library("cytometree")
Maintained by
Boris P Hejblum
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-06-26
Latest Update: 2019-12-04
Description:
Given the hypothesis of a bi-modal distribution of cells for each marker, the algorithm constructs a binary tree, the nodes of which are subpopulations of cells. At each node, observed cells and markers are modeled by both a family of normal distributions and a family of bi-modal normal mixture distributions. Splitting is done according to a normalized difference of AIC between the two families. Method is detailed in: Commenges, Alkhassim, Gottardo, Hejblum & Thiebaut (2018) .
How to cite:
Boris P Hejblum (2017). cytometree: Automated Cytometry Gating and Annotation. R package version 2.0.2, https://cran.r-project.org/web/packages/cytometree
Previous versions and publish date:
1.0.0 (2017-06-26 01:01), 1.0.1 (2017-07-03 15:30), 1.1.1 (2017-10-22 18:26), 1.2.0 (2018-08-28 23:14), 1.3.0 (2019-01-12 14:10), 2.0.0 (2019-08-19 20:30)
Other packages that cited cytometree R package
View cytometree citation profile
Other R packages that cytometree depends, imports, suggests or enhances
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

critpath  
Setting the Critical Path in Project Management
Solving the problem of project management using CPM (Critical Path Method), PERT (Program Evaluation ...
Download / Learn more Package Citations See dependency  
ftaproxim  
Fault Tree Analysis Based on Proxel Simulation
Calculation and plotting of instantaneous unavailabilities of basic events along with the top event ...
Download / Learn more Package Citations See dependency  
steepness  
Testing Steepness of Dominance Hierarchies
The steepness package computes steepness as a property of dominance hierarchies. Steepness is define ...
Download / Learn more Package Citations See dependency  
rdbnomics  
Download DBnomics Data
R access to hundreds of millions data series from DBnomics API (). ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
mistral  
Methods in Structural Reliability
Various reliability analysis methods for rare event inference (computing failure probability and qua ...
Download / Learn more Package Citations See dependency  

22,114

R Packages

188,080

Dependencies

55,244

Author Associations

22,115

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net. Contact Us / Suggestions / Concerns