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cutpointr
View on CRAN: Click
here
Download and install cutpointr package within the R console
Install from CRAN:
install.packages("cutpointr")
Install from Github:
library("remotes")
install_github("cran/cutpointr")
Install by package version:
library("remotes")
install_version("cutpointr", "1.2.0")
Attach the package and use:
library("cutpointr")
Maintained by
Christian Thiele
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
10.32614/CRAN.package.cutpointr . https://github.com/thie1e/cutpointr/issues . https://github.com/thie1e/cutpointr . cutpointr citation info . cutpointr results . cutpointr.pdf . An introduction to cutpointr . cutpointr benchmarks . Bootstrapping with cutpointr . Plotting with cutpointr . ROC curves with cutpointr . cutpointr_1.2.0.tar.gz . cutpointr_1.2.0.zip . cutpointr_1.2.0.zip . cutpointr_1.2.0.zip . cutpointr_1.2.0.tgz . cutpointr_1.2.0.tgz . cutpointr_1.2.0.tgz . cutpointr_1.2.0.tgz . cutpointr archive . https://CRAN.R-project.org/package=cutpointr .
First Published: 2018-03-21
Latest Update: 2022-04-13
Description:
Estimate cutpoints that optimize a specified metric in binary classification tasks
and validate performance using bootstrapping. Some methods for more robust cutpoint
estimation are supported, e.g. a parametric method assuming normal distributions,
bootstrapped cutpoints, and smoothing of the metric values per cutpoint using
Generalized Additive Models. Various plotting functions are included. For an overview
of the package see Thiele and Hirschfeld (2021) .
How to cite:
Christian Thiele (2018). cutpointr: Determine and Evaluate Optimal Cutpoints in Binary Classification Tasks. R package version 1.2.0, https://cran.r-project.org/web/packages/cutpointr. Accessed 07 May. 2025.
Previous versions and publish date:
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Other R packages that cutpointr depends,
imports, suggests or enhances
Complete documentation for cutpointr
Functions, R codes and Examples using
the cutpointr R package
Some associated functions: F1_score . Jaccard . abs_d_ppv_npv . abs_d_sens_spec . accuracy . add_metric . auc . boot_ci . boot_test . cohens_kappa . cutpoint . cutpoint_knots . cutpointr . cutpointr_ . false_omission_rate . maximize_boot_metric . maximize_gam_metric . maximize_loess_metric . maximize_metric . maximize_spline_metric . metric_constrain . misclassification_cost . multi_cutpointr . npv . oc_manual . oc_mean . oc_median . oc_youden_kernel . oc_youden_normal . odds_ratio . p_chisquared . plot.cutpointr . plot.multi_cutpointr . plot.roc_cutpointr . plot_cut_boot . plot_cutpointr . plot_metric . plot_metric_boot . plot_precision_recall . plot_roc . plot_sensitivity_specificity . plot_x . plr . ppv . precision . predict.cutpointr . print.cutpointr . print.multi_cutpointr . prod_ppv_npv . prod_sens_spec . prostate_nodal . recall . risk_ratio . roc . roc01 . sensitivity . specificity . suicide . sum_ppv_npv . sum_sens_spec . total_utility . tp . tpr . user_span_cutpointr . youden .
Some associated R codes: RcppExports.R . add_metric.R . boot_ci.R . boot_test.R . compat-lifecycle.R . cutpointr.R . data.R . globals.R . grid_arrange_shared_legend.R . metrics.R . oc_manual.R . oc_mean.R . oc_median.R . oc_youden_kernel.R . oc_youden_normal.R . optimize_metric.R . plot.cutpointr.R . plot.multi_cutpointr.R . plot_cut_boot.R . plot_cutpointr.R . plot_metric.R . plot_metric_boot.R . plot_precision_recall.R . plot_roc.R . plot_sensitivity_specificity.R . plot_x.R . predict.cutpointr.R . prep.R . print.cutpointr.R . print.multi_cutpointr.R . print.summary_cutpointr.R . print.summary_multi_cutpointr.R . roc.R . summary.cutpointr.R . summary.multi_cutpointr.R . utils.R . Full cutpointr package functions and examples
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