Other packages > Find by keyword >

cuperdec  

Cumulative Percent Decay Curve Generator
View on CRAN: Click here


Download and install cuperdec package within the R console
Install from CRAN:
install.packages("cuperdec")

Install from Github:
library("remotes")
install_github("cran/cuperdec")

Install by package version:
library("remotes")
install_version("cuperdec", "1.1.0")



Attach the package and use:
library("cuperdec")
Maintained by
James A. Fellows Yates
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-04-07
Latest Update: 2021-09-12
Description:
Calculates and visualises cumulative percent 'decay' curves, which are typically calculated from metagenomic taxonomic profiles. These can be used to estimate the level of expected 'endogenous' taxa at different abundance levels retrieved from metagenomic samples, when comparing to samples of known sampling site or source. Method described in Fellows Yates, J. A. et. al. (2021) Proceedings of the National Academy of Sciences USA .
How to cite:
James A. Fellows Yates (2021). cuperdec: Cumulative Percent Decay Curve Generator. R package version 1.1.0, https://cran.r-project.org/web/packages/cuperdec
Previous versions and publish date:
1.0.0 (2021-04-07 10:40)
Other packages that cited cuperdec R package
View cuperdec citation profile
Other R packages that cuperdec depends, imports, suggests or enhances
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

FMCCSD  
Efficient Estimation of Clustered Current Status Data
Current status data abounds in the field of epidemiology and public health, where the only observab ...
Download / Learn more Package Citations See dependency  
QuantileNPCI  
Nonparametric Confidence Intervals for Quantiles
Based on Alan D. Hutson (1999) , "Calculating nonparametric confidence i ...
Download / Learn more Package Citations See dependency  
Maintainer: Li Yan (view profile)
r2resize  
In-Text Resizer for Images, Tables and Fancy Resizable Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
cdcfluview  
Retrieve Flu Season Data from the United States Centers for Disease Control and Prevention ("CDC") "FluView" Portal
The 'U.S.' Centers for Disease Control and Prevention (CDC) maintain a portal ...
Download / Learn more Package Citations See dependency  
factorplot  
Graphical Presentation of Simple Contrasts
Methods to calculate, print, summarize and plot pairwise differences from GLMs, GLHT or Multinomial ...
Download / Learn more Package Citations See dependency  
srm  
Structural Equation Modeling for the Social Relations Model
Provides functionality for structural equation modeling for the social relations model (Kenny & ...
Download / Learn more Package Citations See dependency  

22,114

R Packages

188,080

Dependencies

55,244

Author Associations

22,115

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net. Contact Us / Suggestions / Concerns