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cumSeg  

Change Point Detection in Genomic Sequences
View on CRAN: Click here


Download and install cumSeg package within the R console
Install from CRAN:
install.packages("cumSeg")

Install from Github:
library("remotes")
install_github("cran/cumSeg")

Install by package version:
library("remotes")
install_version("cumSeg", "1.3")



Attach the package and use:
library("cumSeg")
Maintained by
Vito M.R. Muggeo
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2010-08-05
Latest Update: 2020-07-17
Description:
Estimation of number and location of change points in mean-shift (piecewise constant) models. Particularly useful (but not confined) to model genomic sequences of continuous measurements.
How to cite:
Vito M.R. Muggeo (2010). cumSeg: Change Point Detection in Genomic Sequences. R package version 1.3, https://cran.r-project.org/web/packages/cumSeg. Accessed 22 Dec. 2024.
Previous versions and publish date:
1.0 (2010-08-05 12:45), 1.1 (2012-10-29 08:58), 1.2 (2019-01-18 13:40)
Other packages that cited cumSeg R package
View cumSeg citation profile
Other R packages that cumSeg depends, imports, suggests or enhances
Complete documentation for cumSeg
Functions, R codes and Examples using the cumSeg R package
Some associated functions: cumSeg-package . fibroblast . fit.control . jumpoints . plot.aCGHsegmented . print.aCGHsegmented . sel.control . 
Some associated R codes: fit.control.R . jumpoints.R . plot.aCGHsegmented.R . print.aCGHsegmented.R . sel.control.R .  Full cumSeg package functions and examples
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