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ctgt  

Closed Testing with Globaltest for Pathway Analysis
View on CRAN: Click here


Download and install ctgt package within the R console
Install from CRAN:
install.packages("ctgt")

Install from Github:
library("remotes")
install_github("cran/ctgt")

Install by package version:
library("remotes")
install_version("ctgt", "2.0.1")



Attach the package and use:
library("ctgt")
Maintained by
Ningning Xu
[Scholar Profile | Author Map]
First Published: 2020-03-08
Latest Update: 2021-06-07
Description:
A shortcut procedure is proposed to implement closed testing for large-scale multiple testings, especially with the global test. This shortcut is asymptotically equivalent to closed testing and post hoc. Users could detect any possible sets of features or pathways with family-wise error rate controlled. The global test is powerful to detect associations between a group of features and an outcome of interest.
How to cite:
Ningning Xu (2020). ctgt: Closed Testing with Globaltest for Pathway Analysis. R package version 2.0.1, https://cran.r-project.org/web/packages/ctgt. Accessed 29 Mar. 2025.
Previous versions and publish date:
1.0 (2020-03-08 19:50), 2.0 (2021-06-07 17:10)
Other packages that cited ctgt R package
View ctgt citation profile
Other R packages that ctgt depends, imports, suggests or enhances
Complete documentation for ctgt
Functions, R codes and Examples using the ctgt R package
Some associated functions: actgt . criticalvalue . ctgt-internalfunctions . ctgt-package . discoveries . getL . gt2 . pv . 
Some associated R codes: RcppExports.R . actgt.R . discoveries.R . gt2.R .  Full ctgt package functions and examples
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