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corrcoverage
View on CRAN: Click
here
Download and install corrcoverage package within the R console
Install from CRAN:
install.packages("corrcoverage")
Install from Github:
library("remotes")
install_github("cran/corrcoverage")
Install by package version:
library("remotes")
install_version("corrcoverage", "1.2.1")
Attach the package and use:
library("corrcoverage")
Maintained by
Anna Hutchinson
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-08-28
Latest Update: 2019-12-06
Description:
Using a computationally efficient method, the package can
be used to find the corrected coverage estimate of a credible set
of putative causal variants from Bayesian genetic fine-mapping.
The package can also be used to obtain a corrected credible set
if required; that is, the smallest set of variants required such
that the corrected coverage estimate of the resultant credible set is
within some user defined accuracy of the desired coverage.
Maller et al. (2012) ,
Wakefield (2009) ,
Fortune and Wallace (2018) .
How to cite:
Anna Hutchinson (2019). corrcoverage: Correcting the Coverage of Credible Sets from Bayesian Genetic Fine Mapping. R package version 1.2.1, https://cran.r-project.org/web/packages/corrcoverage. Accessed 06 Nov. 2024.
Previous versions and publish date:
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Other R packages that corrcoverage depends,
imports, suggests or enhances
Complete documentation for corrcoverage
Functions, R codes and Examples using
the corrcoverage R package
Some associated functions: Var.data.cc . approx.bf.p . bf_func . cor2 . corrcov . corrcov_CI . corrcov_CI_bhat . corrcov_bhat . corrcov_nvar . corrcov_nvar_bhat . corrected_cov . corrected_cs . corrected_cs_bhat . credset . credsetC . credsetmat . dot-zj_abf . dot-zj_pp . est_mu . est_mu_bhat . logsum . logsum_matrix . pipe . ppfunc.mat . ppfunc . prop_cov . pvals_pp . z0_pp . z_sim . zj_pp .
Some associated R codes: RcppExports.R . corrected_cov_functions.R . corrected_credset.R . extra_functions.R . func_utils.R . posterior_prob_functions.R . utils-pipe.R . z_simulation_functions.R . Full corrcoverage package functions and examples
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