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corncob  

Count Regression for Correlated Observations with the Beta-Binomial
View on CRAN: Click here


Download and install corncob package within the R console
Install from CRAN:
install.packages("corncob")

Install from Github:
library("remotes")
install_github("cran/corncob")

Install by package version:
library("remotes")
install_version("corncob", "0.4.1")



Attach the package and use:
library("corncob")
Maintained by
Amy D Willis
[Scholar Profile | Author Map]
First Published: 2021-03-11
Latest Update: 2024-01-10
Description:
Statistical modeling for correlated count data using the beta-binomial distribution, described in Martin et al. (2020) . It allows for both mean and overdispersion covariates.
How to cite:
Amy D Willis (2021). corncob: Count Regression for Correlated Observations with the Beta-Binomial. R package version 0.4.1, https://cran.r-project.org/web/packages/corncob. Accessed 29 Mar. 2025.
Previous versions and publish date:
0.2.0 (2021-03-11 16:00), 0.3.0 (2022-09-23 22:20), 0.3.1 (2022-12-05 21:00), 0.3.2 (2023-08-31 05:10), 0.4.1 (2024-01-10 22:03)
Other packages that cited corncob R package
View corncob citation profile
Other R packages that corncob depends, imports, suggests or enhances
Complete documentation for corncob
Functions, R codes and Examples using the corncob R package
Some associated functions: HDIbetabinom . bbdml . checkNested . clean_taxa_names . contrastsTest . convert_phylo . corncob-package . coth . dbetabin . dbetabin_neg . dbetabinom_cts . differentialTest . doBoot . fishZ . genInits . getRestrictionTerms . gr_full . hessian . ibd_phylo_otu . ibd_phylo_sample . ibd_phylo_taxa . invfishZ . invlogit . logit . lrtest . objfun . otu_to_taxonomy . pbLRT . pbRao . pbWald . pipe . plot.bbdml . plot.differentialTest . print.bbdml . print.differentialTest . print.summary.bbdml . qbetabinom . raotest . sandSE . sand_vcov . score . simulate.bbdml . soil_phylo_otu . soil_phylo_sample . soil_phylo_taxa . soil_phylum_contrasts_otu . soil_phylum_contrasts_sample . soil_phylum_small_otu . soil_phylum_small_otu1 . soil_phylum_small_sample . summary.bbdml . waldchisq . waldchisq_test . waldt . warn_phyloseq . 
Some associated R codes: HDIbetabinom.R . bbdml.R . checkNested.R . clean_taxa_names.R . contrastsTest.R . convert_phylo.R . corncob.R . dbetabin.R . dbetabinom_ee.R . differentialTest.R . doBoot.R . genInits.R . getRestrictionTerms.R . gr_full.R . hessian.R . ibd_phylo_otu.R . ibd_phylo_sample.R . ibd_phylo_taxa.R . links.R . lrtest.R . objfun.R . otu_to_taxonomy.R . pbLRT.R . pbRao.R . pbWald.R . plot_bbdml.R . plot_differentialTest.R . print_bbdml.R . print_differentialTest.R . print_summary_bbdml.R . qbetabinom.R . rao.R . sandSE.R . score.R . separation.R . simulate.R . soil_phylo_otu.R . soil_phylo_sample.R . soil_phylo_taxa.R . soil_phylum_contrasts_otu.R . soil_phylum_contrasts_sample.R . soil_phylum_small_otu.R . soil_phylum_small_otu1.R . soil_phylum_small_sample.R . summary_bbdml.R . utils-pipe.R . wald.R . warn_phyloseq.R .  Full corncob package functions and examples
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