Other packages > Find by keyword >

corehunter  

Multi-Purpose Core Subset Selection
View on CRAN: Click here


Download and install corehunter package within the R console
Install from CRAN:
install.packages("corehunter")

Install from Github:
library("remotes")
install_github("cran/corehunter")

Install by package version:
library("remotes")
install_version("corehunter", "3.2.3")



Attach the package and use:
library("corehunter")
Maintained by
Herman De Beukelaer
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-10-04
Latest Update: 2023-09-01
Description:
Core Hunter is a tool to sample diverse, representative subsets from large germplasm collections, with minimum redundancy. Such so-called core collections have applications in plant breeding and genetic resource management in general. Core Hunter can construct cores based on genetic marker data, phenotypic traits or precomputed distance matrices, optimizing one of many provided evaluation measures depending on the precise purpose of the core (e.g. high diversity, representativeness, or allelic richness). In addition, multiple measures can be simultaneously optimized as part of a weighted index to bring the different perspectives closer together. The Core Hunter library is implemented in Java 8 as an open source project (see ).
How to cite:
Herman De Beukelaer (2016). corehunter: Multi-Purpose Core Subset Selection. R package version 3.2.3, https://cran.r-project.org/web/packages/corehunter. Accessed 18 Sep. 2026.
Previous versions and publish date:
(2026-07-09 07:28), 3.0.0 (2016-10-04 00:14), 3.0.1 (2016-10-04 16:13), 3.1.0 (2017-02-20 19:15), 3.2.0 (2017-09-08 14:07), 3.2.1 (2018-04-16 21:17), 3.2.2 (2023-05-11 17:50)
Other packages that cited corehunter R package
View corehunter citation profile
Other R packages that corehunter depends, imports, suggests or enhances
Complete documentation for corehunter
Functions, R codes and Examples using the corehunter R package
Some associated functions: coreHunterData . corehunter-package . distances . evaluateCore . exampleData . genotypes . getAlleleFrequencies . getNormalizationRanges . objective . phenotypes . read.autodelim . sampleCore . setRange . wrapData . 
Some associated R codes: analysis.R . corehunter-package.R . data.R . execution.R . java.R . zzz.R .  Full corehunter package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

data360r  
Wrapper for 'TCdata360' and 'Govdata360' API
Makes it easy to engage with the Application Program Interface (API) of the 'TCdata360' and 'Govdat ...
Download / Learn more Package Citations See dependency  
eyelinker  
Import ASC Files from EyeLink Eye Trackers
Imports plain-text ASC data files from EyeLink eye trackers into (relatively) tidy data frames for ...
Download / Learn more Package Citations See dependency  
downlit  
Syntax Highlighting and Automatic Linking
Syntax highlighting of R code, specifically designed for the needs of 'RMarkdown' packages like 'pk ...
Download / Learn more Package Citations See dependency  
injectoR  
R Dependency Injection
R dependency injection framework. Dependency injection allows a program design to follow the depend ...
Download / Learn more Package Citations See dependency  
hmeasure  
The H-Measure and Other Scalar Classification Performance Metrics
Classification performance metrics that are derived from the ROC curve of a classifier. The package ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  

28,565

R Packages

239,283

Dependencies

75,677

Author Associations

28,566

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA