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corHMM
View on CRAN: Click
here
Download and install corHMM package within the R console
Install from CRAN:
install.packages("corHMM")
Install from Github:
library("remotes")
install_github("cran/corHMM")
Install by package version:
library("remotes")
install_version("corHMM", "2.8")
Attach the package and use:
library("corHMM")
Maintained by
Jeremy Beaulieu
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2013-05-13
Latest Update: 2022-06-13
Description:
Fits hidden Markov models of discrete character evolution which allow different transition rate classes on different portions of a phylogeny. Beaulieu et al (2013) .
How to cite:
Jeremy Beaulieu (2013). corHMM: Hidden Markov Models of Character Evolution. R package version 2.8, https://cran.r-project.org/web/packages/corHMM. Accessed 21 Nov. 2024.
Previous versions and publish date:
1.10 (2013-05-13 18:29), 1.11 (2013-09-23 08:09), 1.12 (2013-09-24 08:20), 1.13 (2014-02-20 06:56), 1.14 (2014-07-11 06:41), 1.15 (2014-09-18 07:31), 1.16 (2015-04-08 07:26), 1.17 (2015-10-30 01:08), 1.18 (2016-01-07 10:22), 1.19 (2016-06-09 06:18), 1.20 (2016-09-27 08:41), 1.22 (2017-07-20 00:21), 2.1 (2020-07-08 00:30), 2.2 (2020-07-09 00:40), 2.3 (2020-08-05 23:20), 2.4 (2020-10-01 09:30), 2.5 (2020-11-24 16:50), 2.6 (2021-01-06 18:30), 2.7 (2021-05-14 23:12)
Other packages that cited corHMM R package
View corHMM citation profile
Other R packages that corHMM depends,
imports, suggests or enhances
Complete documentation for corHMM
Functions, R codes and Examples using
the corHMM R package
Some associated functions: ConvertPhangornReconstructions . ancRECON . corDISC . corHMM . fitCorrelationTest . getFullMat . getRateMat4Dat . makeSimmap . plotMKmodel . plotRECON . primates . rayDISC .
Some associated R codes: ancRECON.R . convertPhangorn.R . corDISC.R . corHMM.R . fitCorrelationTest.R . makeSimmap.R . plotMKmodel.R . plotRECON.R . rate.mat.maker.R . rayDISC.R . testCode.R . Full corHMM package functions and examples
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