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cophescan  

Adaptation of the Coloc Method for PheWAS
View on CRAN: Click here


Download and install cophescan package within the R console
Install from CRAN:
install.packages("cophescan")

Install from Github:
library("remotes")
install_github("cran/cophescan")

Install by package version:
library("remotes")
install_version("cophescan", "1.4.2")



Attach the package and use:
library("cophescan")
Maintained by
Ichcha Manipur
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-10-25
Latest Update: 2025-07-30
Description:
A Bayesian method for Phenome-wide association studies (PheWAS) that identifies causal associations between genetic variants and traits, while simultaneously addressing confounding due to linkage disequilibrium. For details see Manipur et al (2023) .
How to cite:
Ichcha Manipur (2023). cophescan: Adaptation of the Coloc Method for PheWAS. R package version 1.4.2, https://cran.r-project.org/web/packages/cophescan. Accessed 05 Mar. 2026.
Previous versions and publish date:
1.3.2 (2023-10-25 09:00), 1.4.0 (2024-03-11 21:00), 1.4.1 (2024-06-11 17:20)
Other packages that cited cophescan R package
View cophescan citation profile
Other R packages that cophescan depends, imports, suggests or enhances
Complete documentation for cophescan
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