Other packages > Find by keyword >

cophescan  

Adaptation of the Coloc Method for PheWAS
View on CRAN: Click here


Download and install cophescan package within the R console
Install from CRAN:
install.packages("cophescan")

Install from Github:
library("remotes")
install_github("cran/cophescan")

Install by package version:
library("remotes")
install_version("cophescan", "1.4.2")



Attach the package and use:
library("cophescan")
Maintained by
Ichcha Manipur
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-10-25
Latest Update: 2025-07-30
Description:
A Bayesian method for Phenome-wide association studies (PheWAS) that identifies causal associations between genetic variants and traits, while simultaneously addressing confounding due to linkage disequilibrium. For details see Manipur et al (2023) .
How to cite:
Ichcha Manipur (2023). cophescan: Adaptation of the Coloc Method for PheWAS. R package version 1.4.2, https://cran.r-project.org/web/packages/cophescan. Accessed 05 Jun. 2026.
Previous versions and publish date:
1.3.2 (2023-10-25 09:00), 1.4.0 (2024-03-11 21:00), 1.4.1 (2024-06-11 17:20), 1.4.2 (2025-07-30 22:00)
Other packages that cited cophescan R package
View cophescan citation profile
Other R packages that cophescan depends, imports, suggests or enhances
Complete documentation for cophescan
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

crossurr  
Cross-Fitting for Doubly Robust Evaluation of High-Dimensional Surrogate Markers
Doubly robust methods for evaluating surrogate markers as outlined in: Agniel D, Hejblum BP, Thiebau ...
Download / Learn more Package Citations See dependency  
ibb  
R Wrapper for Istanbul Municipality Open Data Portal
Call wrappers for Istanbul Metropolitan Municipality's Open Data Portal (Turkish: Istanbul B ...
Download / Learn more Package Citations See dependency  
envirem  
Generation of ENVIREM Variables
Generation of bioclimatic rasters that are complementary to the typical 19 bioclim variables. ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
msm  
Multi-State Markov and Hidden Markov Models in Continuous Time
Functions for fitting continuous-time Markov and hidden Markov multi-state models to longitudinal d ...
Download / Learn more Package Citations See dependency  

27,268

R Packages

233,548

Dependencies

72,590

Author Associations

27,205

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA