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cooccure  

Co-Occurrence Network Construction and Manipulation
View on CRAN: Click here


Download and install cooccure package within the R console
Install from CRAN:
install.packages("cooccure")

Install from Github:
library("remotes")
install_github("cran/cooccure")

Install by package version:
library("remotes")
install_version("cooccure", "0.1.1")



Attach the package and use:
library("cooccure")
Maintained by
Mohammed Saqr
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-04-24
Latest Update: 2026-04-24
Description:
Constructs co-occurrence networks from several types of input data, such as delimited fields, long/bipartite tables, binary matrices, or wide sequences. Returns tidy edge data frames and supports optional scaling, splitting into several networks, thresholding, and subsetting. Provides eight similarity measures, including Jaccard, cosine, and association strength. Supports export to several network and file formats. Network construction and analysis methods follow Saqr, Lopez-Pernas, Conde, and Hernandez-Garcia (2024, <doi:10.1007/978-3-031-54464-4_15>).
How to cite:
Mohammed Saqr (2026). cooccure: Co-Occurrence Network Construction and Manipulation. R package version 0.1.1, https://cran.r-project.org/web/packages/cooccure. Accessed 06 Jun. 2026.
Previous versions and publish date:
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Complete documentation for cooccure
Functions, R codes and Examples using the cooccure R package
Full cooccure package functions and examples
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