R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
cooccur
View on CRAN: Click
here
Download and install cooccur package within the R console
Install from CRAN:
install.packages("cooccur")
Install from Github:
library("remotes")
install_github("cran/cooccur")
Install by package version:
library("remotes")
install_version("cooccur", "1.3")
Attach the package and use:
library("cooccur")
Maintained by
Daniel M. Griffith
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2014-03-09
Latest Update: 2016-02-09
Description:
This R package applies the probabilistic model of species co-occurrence (Veech 2013) to a set of species distributed among a set of survey or sampling sites. The algorithm calculates the observed and expected frequencies of co-occurrence between each pair of species. The expected frequency is based on the distribution of each species being random and independent of the other species. The analysis returns the probabilities that a more extreme (either low or high) value of co-occurrence could have been obtained by chance. The package also includes functions for visualizing species co-occurrence results and preparing data for downstream analyses.
How to cite:
Daniel M. Griffith (2014). cooccur: Probabilistic Species Co-Occurrence Analysis in R. R package version 1.3, https://cran.r-project.org/web/packages/cooccur. Accessed 21 Nov. 2024.
Previous versions and publish date:
Other packages that cited cooccur R package
View cooccur citation profile
Other R packages that cooccur depends,
imports, suggests or enhances
Complete documentation for cooccur
Functions, R codes and Examples using
the cooccur R package
Some associated functions: beetles . cooccur-package . cooccur . coprob . coprobbase . create.N.matrix . effect.sizes . finches . obs.v.exp . pair.attributes . pair . pair.profile . plot.cooccur . print.cooccur . prob.table . rodents . summary.cooccur .
Some associated R codes: cooccur-internal.R . cooccur.R . coprob.R . coprobbase.R . create.N.matrix.R . effect.sizes.R . obs.v.exp.R . pair.R . pair.attributes.R . pair.profile.R . plot.cooccur.R . print.cooccur.R . prob.table.R . summary.cooccur.R . Full cooccur package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by
helping add
Reviews / comments / questions /suggestions ↴↴↴
Today's Hot Picks in Authors and Packages
SCBiclust
Identifies a bicluster, a submatrix of the data such that the features and observations within the s ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Erika S. Helgeson (view profile)
r2resize
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
kgschart
Restore underlining numeric data from rating history graph of
KGS (an online platform of the game o ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Kota Mori (view profile)
RcppHNSW
'Hnswlib' is a C++ library for Approximate Nearest Neighbors.
This package provides a minimal R int ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: James Melville (view profile)
pkgdepends
Find recursive dependencies of 'R' packages from various
sources. Solve the dependencies to obtain ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Gábor Csárdi (view profile)
deductive
Attempt to repair inconsistencies and missing values in
data records by using information from vali ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Mark van der Loo (view profile)