Other packages > Find by keyword >

combiroc  

Selection and Ranking of Omics Biomarkers Combinations Made Easy
View on CRAN: Click here


Download and install combiroc package within the R console
Install from CRAN:
install.packages("combiroc")

Install from Github:
library("remotes")
install_github("cran/combiroc")

Install by package version:
library("remotes")
install_version("combiroc", "0.3.4")



Attach the package and use:
library("combiroc")
Maintained by
Riccardo L. Rossi
[Scholar Profile | Author Map]
First Published: 2021-08-17
Latest Update: 2023-07-06
Description:
Provides functions and a workflow to easily and powerfully calculating specificity, sensitivity and ROC curves of biomarkers combinations. Allows to rank and select multi-markers signatures as well as to find the best performing sub-signatures, now also from single-cell RNA-seq datasets. The method used was first published as a Shiny app and described in Mazzara et al. (2017) and further described in Bombaci & Rossi (2019) , and widely expanded as a package as presented in the bioRxiv pre print Ferrari et al. .
How to cite:
Riccardo L. Rossi (2021). combiroc: Selection and Ranking of Omics Biomarkers Combinations Made Easy. R package version 0.3.4, https://cran.r-project.org/web/packages/combiroc. Accessed 05 May. 2025.
Previous versions and publish date:
0.2.3 (2021-08-17 08:40)
Other packages that cited combiroc R package
View combiroc citation profile
Other R packages that combiroc depends, imports, suggests or enhances
Complete documentation for combiroc
Downloads during the last 30 days
04/0504/0604/0704/0804/0904/1004/1104/1204/1304/1404/1504/1604/1704/1804/1904/2004/2104/2204/2304/2404/2504/2604/2704/2804/2904/3005/0105/03Downloads for combiroc051015202530TrendBars

Today's Hot Picks in Authors and Packages

cape  
Combined Analysis of Pleiotropy and Epistasis for Diversity Outbred Mice
Combined Analysis of Pleiotropy and Epistasis infers predictive networks between genetic variants a ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
rsvd  
Randomized Singular Value Decomposition
Low-rank matrix decompositions are fundamental tools and widely used for data analysis, dimension r ...
Download / Learn more Package Citations See dependency  
lifecourse  
Quantification of Lifecourse Fluidity
Provides in built datasets and three functions. These functions are mobility_index, nonStanTest and ...
Download / Learn more Package Citations See dependency  
BINCOR  
Estimate the Correlation Between Two Irregular Time Series
Estimate the correlation between two irregular time series that are not necessarily sampled on ident ...
Download / Learn more Package Citations See dependency  
pdqr  
Work with Custom Distribution Functions
Create, transform, and summarize custom random variables with distribution functions (analogues of ...
Download / Learn more Package Citations See dependency  

24,187

R Packages

207,311

Dependencies

65,312

Author Associations

24,143

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA