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combat.enigma
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Download and install combat.enigma package within the R console
Install from CRAN:
install.packages("combat.enigma")
Install from Github:
library("remotes")
install_github("cran/combat.enigma")
Install by package version:
library("remotes")
install_version("combat.enigma", "1.0")
Attach the package and use:
library("combat.enigma")
Maintained by
Joaquim Radua
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-10-06
Latest Update: 2023-10-06
Description:
Fit and apply ComBat to harmonize magnetic resonance imaging (MRI) data from different sites. Briefly, ComBat is a batch adjustment method that removes additive and multiplicative differences between sites due to the use of different scanning devices. As detailed in the manual, the original function was first modified for the harmonization of MRI data (Fortin et al. (2017) ) and then modified again to create separate functions for fitting and applying the harmonization and allow missing values and constant rows for its use within the Enhancing Neuro Imaging Genetics through Meta-Analysis (ENIGMA) Consortium (Radua et al. (2020) ). This package includes the latter version.
How to cite:
Joaquim Radua (2023). combat.enigma: Fit and Apply ComBat Harmonization for ENIGMA. R package version 1.0, https://cran.r-project.org/web/packages/combat.enigma
Previous versions and publish date:
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Functions, R codes and Examples using
the combat.enigma R package
Some associated functions: combat_apply . combat_example . combat_fit .
Some associated R codes: source.R . Full combat.enigma package functions and examples
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