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colocr  

Conduct Co-Localization Analysis of Fluorescence Microscopy Images
View on CRAN: Click here


Download and install colocr package within the R console
Install from CRAN:
install.packages("colocr")

Install from Github:
library("remotes")
install_github("cran/colocr")

Install by package version:
library("remotes")
install_version("colocr", "0.1.1")



Attach the package and use:
library("colocr")
Maintained by
Mahmoud Ahmed
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-05-31
Latest Update:
Description:
Automate the co-localization analysis of fluorescence microscopy images. Selecting regions of interest, extract pixel intensities from the image channels and calculate different co-localization statistics. The methods implemented in this package are based on Dunn et al. (2011) .
How to cite:
Mahmoud Ahmed (2019). colocr: Conduct Co-Localization Analysis of Fluorescence Microscopy Images. R package version 0.1.1, https://cran.r-project.org/web/packages/colocr. Accessed 25 Jun. 2026.
Previous versions and publish date:
0.1.0 (2019-05-31 11:40), 0.1.1 (2020-05-08 15:20)
Other packages that cited colocr R package
View colocr citation profile
Other R packages that colocr depends, imports, suggests or enhances
Complete documentation for colocr
Functions, R codes and Examples using the colocr R package
Some associated functions: colocr . colocr_app . dot-intensity_get . dot-labels_add . dot-manders . dot-pearson . image_load . reexports . roi_check . roi_select . roi_show . roi_test . 
Some associated R codes: colocr.R . helpers.R . methods.R .  Full colocr package functions and examples
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