Other packages > Find by keyword >

codacore  

Learning Sparse Log-Ratios for Compositional Data
View on CRAN: Click here


Download and install codacore package within the R console
Install from CRAN:
install.packages("codacore")

Install from Github:
library("remotes")
install_github("cran/codacore")

Install by package version:
library("remotes")
install_version("codacore", "0.0.4")



Attach the package and use:
library("codacore")
Maintained by
Elliott Gordon-Rodriguez
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-01-07
Latest Update: 2022-08-29
Description:
In the context of high-throughput genetic data, CoDaCoRe identifies a set of sparse biomarkers that are predictive of a response variable of interest (Gordon-Rodriguez et al., 2021) . More generally, CoDaCoRe can be applied to any regression problem where the independent variable is Compositional (CoDa), to derive a set of scale-invariant log-ratios (ILR or SLR) that are maximally associated to a dependent variable.
How to cite:
Elliott Gordon-Rodriguez (2022). codacore: Learning Sparse Log-Ratios for Compositional Data. R package version 0.0.4, https://cran.r-project.org/web/packages/codacore. Accessed 27 Aug. 2026.
Previous versions and publish date:
(2026-07-09 07:27), 0.0.3 (2022-01-07 11:10)
Other packages that cited codacore R package
View codacore citation profile
Other R packages that codacore depends, imports, suggests or enhances
Complete documentation for codacore
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

risksetROC  
Riskset ROC Curve Estimation from Censored Survival Data
Compute time-dependent Incident/dynamic accuracy measures (ROC curve, AUC, integrated AUC )from cen ...
Download / Learn more Package Citations See dependency  
IntervalQuestionStat  
Tools to Deal with Interval-Valued Responses in Questionnaires
A user-friendly toolbox for doing the statistical analysis of interval-valued responses in question ...
Download / Learn more Package Citations See dependency  
Bodi  
Boosting Diversity in Regression Ensembles
A gradient boosting-based algorithm by incorporating a diversity term to guide the gradient boosting ...
Download / Learn more Package Citations See dependency  
BetterReg  
Better Statistics for OLS and Binomial Logistic Regression
Provides squared semi partial correlations, tolerance, Mahalanobis, Likelihood Ratio Chi Square, and ...
Download / Learn more Package Citations See dependency  
ROI.plugin.qpoases  
'qpOASES' Plugin for the 'R' Optimization Infrastructure
Enhances the 'R' Optimization Infrastructure ('ROI') package with the quadratic solver 'qpOASES'. M ...
Download / Learn more Package Citations See dependency  
robustX  
'eXtra' / 'eXperimental' Functionality for Robust Statistics
Robustness -- 'eXperimental', 'eXtraneous', or 'eXtraordinary' Functionality for Robust Statistics. ...
Download / Learn more Package Citations See dependency  

28,332

R Packages

239,283

Dependencies

75,113

Author Associations

28,333

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA