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clusterhap
View on CRAN: Click
here
Download and install clusterhap package within the R console
Install from CRAN:
install.packages("clusterhap")
Install from Github:
library("remotes")
install_github("cran/clusterhap")
Install by package version:
library("remotes")
install_version("clusterhap", "0.1")
Attach the package and use:
library("clusterhap")
Maintained by
Gaston Quero
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-05-16
Latest Update: 2016-05-16
Description:
One haplotype is a combination of SNP
(Single Nucleotide Polymorphisms) within the QTL (Quantitative Trait Loci).
clusterhap groups together all individuals of a population with the same haplotype.
Each group contains individual with the same allele in each SNP,
whether or not missing data. Thus, clusterhap groups individuals,
that to be imputed, have a non-zero probability of having the same alleles
in the entire sequence of SNP's. Moreover, clusterhap calculates such
probability from relative frequencies.
How to cite:
Gaston Quero (2016). clusterhap: Clustering Genotypes in Haplotypes. R package version 0.1, https://cran.r-project.org/web/packages/clusterhap
Previous versions and publish date:
No previous versions
Other packages that cited clusterhap R package
View clusterhap citation profile
Other R packages that clusterhap depends,
imports, suggests or enhances
Functions, R codes and Examples using
the clusterhap R package
Some associated functions: clusterhap . rice_qtl . sim_qtl .
Some associated R codes: clusterhap.R . rice_qtl.R . sim_qtl.R . Full clusterhap package functions and examples
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