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clinDR  

Simulation and Analysis Tools for Clinical Dose Response Modeling
View on CRAN: Click here


Download and install clinDR package within the R console
Install from CRAN:
install.packages("clinDR")

Install from Github:
library("remotes")
install_github("cran/clinDR")

Install by package version:
library("remotes")
install_version("clinDR", "2.4.1")



Attach the package and use:
library("clinDR")
Maintained by
Neal Thomas
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-12-04
Latest Update: 2023-08-09
Description:
Bayesian and ML Emax model fitting, graphics and simulation for clinical dose response. The summary data from the dose response meta-analyses in Thomas, Sweeney, and Somayaji (2014) and Thomas and Roy (2016) Wu, Banerjee, Jin, Menon, Martin, and Heatherington(2017) are included in the package. The prior distributions for the Bayesian analyses default to the posterior predictive distributions derived from these references.
How to cite:
Neal Thomas (2017). clinDR: Simulation and Analysis Tools for Clinical Dose Response Modeling. R package version 2.4.1, https://cran.r-project.org/web/packages/clinDR
Previous versions and publish date:
1.6 (2017-12-04 16:25), 1.7 (2018-02-19 15:34), 1.8 (2018-05-05 00:15), 1.9 (2019-01-04 12:20), 2.2.1 (2019-12-17 18:10), 2.3.5 (2021-04-12 07:40), 2.3 (2020-07-01 07:00)
Other packages that cited clinDR R package
View clinDR citation profile
Other R packages that clinDR depends, imports, suggests or enhances
Functions, R codes and Examples using the clinDR R package
Some associated functions: Brextract . BrextractB . DRDensityPlot . FixedMean . RandEmax . SeEmax . bpchkMonoEmax . checkMonoEmax . clinDR-package . coef . compileStanModels . emaxPrior.control . emaxalt . emaxfun . emaxsim . emaxsimB . emaxsolve . fitEmax . fitEmaxB . mcmc.control . metaData . nllogis . plot.emaxsim . plot.emaxsimB . plot.emaxsimBobj . plot.emaxsimobj . plot.fitEmax . plot.fitEmaxB . plot.plotB . plotB . plotBdensity . plotD . predict.emaxalt . predict.emaxsim . predict.emaxsimB . predict.emaxsimBobj . predict.emaxsimobj . predict.fitEmax . predict.fitEmaxB . print.emaxPrior . print.emaxsim . print.emaxsimB . print.emaxsimBobj . print.emaxsimobj . print.fitEmax . print.fitEmaxB . prior.control . randomEmax . runSimulations . selEstan . showStanModels . sigma . startEmax . summary.emaxsim . summary.emaxsimB . summary.emaxsimBobj . summary.emaxsimobj . summary.fitEmax . summary.fitEmaxB . targetBeta . targetCI . targetD . update.emaxsimobj . vcov . 
Some associated R codes: Brextract.R . DRDensityPlot.R . FixedMean.R . RandEmax.R . SeEmax.R . bpchkMonoEmax.R . checkMonoEmax.R . compileStanModels.R . emaxalt.R . emaxfun.R . emaxsim.R . emaxsimB.R . emaxsolve.R . fitEmax.R . fitEmaxB.R . generic.R . iqr.R . nllogis.R . plot.emaxsim.R . plot.emaxsimB.R . plot.emaxsimobj.R . plot.fitEmax.R . plot.plotB.R . plotB.R . plotBdensity.R . plotD.R . predict.emaxalt.R . predict.emaxsim.R . predict.emaxsimB.R . predict.emaxsimobj.R . predict.fitEmax.R . predict.fitEmaxB.R . print.emaxPrior.R . print.emaxsim.R . print.emaxsimB.R . print.emaxsimobj.R . print.fitEmax.R . randomEmax.R . runSimulations.R . selEstan.R . sequant.R . showStanModels.R . startEmax.R . summary.emaxsim.R . summary.emaxsimB.R . summary.emaxsimobj.R . summary.fitEmax.R . targetBeta.R . targetCI.R . targetD.R . update.emaxsimobj.R .  Full clinDR package functions and examples
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