Other packages > Find by keyword >

circlize  

Circular Visualization
View on CRAN: Click here


Download and install circlize package within the R console
Install from CRAN:
install.packages("circlize")

Install from Github:
library("remotes")
install_github("cran/circlize")

Install by package version:
library("remotes")
install_version("circlize", "0.4.16")



Attach the package and use:
library("circlize")
Maintained by
Zuguang Gu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2013-05-26
Latest Update: 2022-05-10
Description:
Circular layout is an efficient way for the visualization of huge amounts of information. Here this package provides an implementation of circular layout generation in R as well as an enhancement of available software. The flexibility of the package is based on the usage of low-level graphics functions such that self-defined high-level graphics can be easily implemented by users for specific purposes. Together with the seamless connection between the powerful computational and visual environment in R, it gives users more convenience and freedom to design figures for better understanding complex patterns behind multiple dimensional data. The package is described in Gu et al. 2014 .
How to cite:
Zuguang Gu (2013). circlize: Circular Visualization. R package version 0.4.16, https://cran.r-project.org/web/packages/circlize. Accessed 21 Nov. 2024.
Previous versions and publish date:
0.0.2 (2013-05-26 14:46), 0.0.3 (2013-06-02 23:05), 0.0.4 (2013-07-05 20:28), 0.0.5 (2013-08-03 16:58), 0.0.6 (2013-09-02 00:23), 0.0.7 (2013-10-01 23:10), 0.0.8 (2014-06-03 13:36), 0.0.9 (2014-07-11 23:51), 0.1.0 (2014-08-02 23:44), 0.1.1 (2014-09-01 20:44), 0.1.2 (2014-10-13 08:05), 0.1.3 (2014-11-07 00:28), 0.2.0 (2014-12-08 22:24), 0.2.1 (2015-01-09 00:19), 0.2.2 (2015-01-30 07:56), 0.2.3 (2015-02-22 17:33), 0.2.4 (2015-03-20 14:22), 0.2.5 (2015-07-08 09:53), 0.3.0 (2015-08-01 20:34), 0.3.1 (2015-08-19 00:43), 0.3.2 (2015-10-21 10:01), 0.3.3 (2015-11-26 08:33), 0.3.4 (2015-12-22 14:36), 0.3.5 (2016-03-28 23:18), 0.3.6 (2016-04-23 15:35), 0.3.7 (2016-05-15 21:50), 0.3.8 (2016-08-14 15:28), 0.3.9 (2016-09-26 23:38), 0.3.10 (2017-03-07 13:41), 0.4.0 (2017-05-29 13:55), 0.4.1 (2017-07-19 23:48), 0.4.2 (2017-11-18 23:49), 0.4.3 (2017-12-20 17:14), 0.4.4 (2018-06-10 19:35), 0.4.5 (2018-11-21 22:40), 0.4.6 (2019-04-03 20:00), 0.4.7 (2019-08-21 20:10), 0.4.8 (2019-09-08 12:00), 0.4.9 (2020-05-01 00:00), 0.4.10 (2020-06-15 02:00), 0.4.11 (2020-10-31 08:00), 0.4.12 (2021-01-08 16:20), 0.4.13 (2021-06-09 23:40), 0.4.14 (2022-02-11 11:50), 0.4.15 (2022-05-10 21:30)
Other packages that cited circlize R package
View circlize citation profile
Other R packages that circlize depends, imports, suggests or enhances
Complete documentation for circlize
Functions, R codes and Examples using the circlize R package
Some associated functions: CELL_META . Subset.CELL_META . add_transparency . adjacencyList2Matrix . adjacencyMatrix2List . arrange_links_evenly . calc_gap . chordDiagram . chordDiagramFromDataFrame . chordDiagramFromMatrix . circlize-package . circlize . circos.arrow . circos.axis . circos.barplot . circos.boxplot . circos.clear . circos.connect . circos.dendrogram . circos.genomicAxis . circos.genomicDensity . circos.genomicHeatmap . circos.genomicIdeogram . circos.genomicInitialize . circos.genomicLabels . circos.genomicLines . circos.genomicLink . circos.genomicPoints . circos.genomicPosTransformLines . circos.genomicRainfall . circos.genomicRect . circos.genomicText . circos.genomicTrack . circos.genomicTrackPlotRegion . circos.heatmap.initialize . circos.heatmap.link . circos.heatmap . circos.info . circos.initialize . circos.initializeCircularGenome . circos.initializeWithIdeogram . circos.labels . circos.lines . circos.link . circos.nested . circos.par . circos.points . circos.polygon . circos.raster . circos.rect . circos.segments . circos.text . circos.track . circos.trackHist . circos.trackLines . circos.trackPlotRegion . circos.trackPoints . circos.trackText . circos.triangle . circos.update . circos.updatePlotRegion . circos.violin . circos.xaxis . circos.yaxis . cm_h . cm_x . cm_y . col2value . colorRamp2 . convert_height . convert_length . convert_x . convert_y . cytoband.col . degree . draw.sector . fontsize . generateRandomBed . genomicDensity . get.all.sector.index . get.all.track.index . get.cell.meta.data . get.current.chromosome . get.current.sector.index . get.current.track.index . getI . get_most_inside_radius . highlight.chromosome . highlight.sector . inch_h . inch_x . inch_y . inches_h . inches_x . inches_y . mm_h . mm_x . mm_y . names.CELL_META . posTransform.default . posTransform.text . print.CELL_META . rainfallTransform . rand_color . read.chromInfo . read.cytoband . reverse.circlize . set.current.cell . set_track_gap . show.index . smartAlign . uh . ux . uy . 
Some associated R codes: chordDiagram.R . circos.arrow.R . circos.heatmap.R . circos.nested.R . genomic.R . genomic_utils.R . global.R . link.R . low_level.R . overview.R . plot.R . random_color.R . raster.R . regions.R . utils.R . zzz.R .  Full circlize package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

crossrun  
Joint Distribution of Number of Crossings and Longest Run
Joint distribution of number of crossings and the longest run in a series of independent Bernoulli ...
Download / Learn more Package Citations See dependency  
deductive  
Data Correction and Imputation Using Deductive Methods
Attempt to repair inconsistencies and missing values in data records by using information from vali ...
Download / Learn more Package Citations See dependency  
pkgdepends  
Package Dependency Resolution and Downloads
Find recursive dependencies of 'R' packages from various sources. Solve the dependencies to obtain ...
Download / Learn more Package Citations See dependency  
SCBiclust  
Identifies Mean, Variance, and Hierarchically Clustered Biclusters
Identifies a bicluster, a submatrix of the data such that the features and observations within the s ...
Download / Learn more Package Citations See dependency  
kgschart  
KGS Rank Graph Parser
Restore underlining numeric data from rating history graph of KGS (an online platform of the game o ...
Download / Learn more Package Citations See dependency  
RcppHNSW  
'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest Neighbors
'Hnswlib' is a C++ library for Approximate Nearest Neighbors. This package provides a minimal R int ...
Download / Learn more Package Citations See dependency  

23,229

R Packages

199,929

Dependencies

62,984

Author Associations

23,230

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA