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cheddar  

Analysis and Visualisation of Ecological Communities
View on CRAN: Click here


Download and install cheddar package within the R console
Install from CRAN:
install.packages("cheddar")

Install from Github:
library("remotes")
install_github("cran/cheddar")

Install by package version:
library("remotes")
install_version("cheddar", "0.1-639")



Attach the package and use:
library("cheddar")
Maintained by
Lawrence Hudson
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2012-07-17
Latest Update: 2022-09-01
Description:
Provides a flexible, extendable representation of an ecological community and a range of functions for analysis and visualisation, focusing on food web, body mass and numerical abundance data. Allows inter-web comparisons such as examining changes in community structure over environmental, temporal or spatial gradients.
How to cite:
Lawrence Hudson (2012). cheddar: Analysis and Visualisation of Ecological Communities. R package version 0.1-639, https://cran.r-project.org/web/packages/cheddar. Accessed 04 Jan. 2025.
Previous versions and publish date:
0.1-613 (2012-07-17 08:03), 0.1-614 (2012-07-23 12:26), 0.1-616 (2012-09-24 17:40), 0.1-619 (2012-11-23 08:52), 0.1-622 (2013-03-21 18:47), 0.1-624 (2013-12-03 09:31), 0.1-625 (2014-02-26 11:03), 0.1-626 (2014-08-28 12:46), 0.1-629 (2015-04-18 08:56), 0.1-630 (2015-08-24 16:21), 0.1-631.1 (2018-06-09 21:17), 0.1-631 (2016-10-10 13:51), 0.1-633 (2018-06-10 08:08), 0.1-636 (2020-02-13 16:30), 0.1-638 (2022-09-01 16:40)
Other packages that cited cheddar R package
View cheddar citation profile
Other R packages that cheddar depends, imports, suggests or enhances
Complete documentation for cheddar
Functions, R codes and Examples using the cheddar R package
Some associated functions: AggregateCommunities . ApplyByClass . Benguela . BodyMassB . BroadstoneStream . CP . CPS . ChesapeakeBay . CollectionApply . CollectionCPS . CollectionNPS . CollectionTLPS . Community . CommunityCollection . CommunityHas . CommunityPropertyNames . Degree . DegreeDistribution . Intervality . IsCannibal . LinearRegressionByClass . LoadCollection . LoadCommunity . LumpNodes . LumpTrophicSpecies . Millstream . NP . NPS . NodeConnectivity . NodeMNUtilities . NodeNameIndices . NodePropertyNames . NumberOfNodes . NumberOfTrophicLinks . NvMConvexHull . NvMLinearRegressions . NvMTriTrophicStatistics . NvMTriTrophicTable . Omnivory . OrderCollection . OrderCommunity . PlotAuppervAlower . PlotCircularWeb . PlotHelpers . PlotNPS . PlotNPSDistribution . PlotPyramid . PlotRankNPS . PlotSpectrum . PlotTLPS . PlotWagonWheel . PlotWebByLevel . PredationMatrix . PredationMatrixToLinks . QuantitativeDescriptors . RemoveCannibalisticLinks . RemoveIsolatedNodes . RemoveNodes . ResourceLargerThanConsumer . ResourcesByNode . ShortestPaths . SiteBySpeciesMatrix . SkipwithPond . TL84 . TLP . TLPS . ThreeNodeChains . TrophicChains . TrophicChainsStats . TrophicLevels . TrophicLinkPropertyNames . TrophicSimilarity . TrophicSpecies . YthanEstuary . cheddar . pHWebs . subset.CommunityCollection . 
Some associated R codes: aggregate.R . chains.R . community.R . community_MN.R . community_collection.R . community_trophic_links.R . config.R . graph.R . graph_nodes.R . graph_trophic_links.R . graph_util.R . util.R .  Full cheddar package functions and examples
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