Other packages > Find by keyword >

ccml  

Consensus Clustering for Different Sample Coverage Data
View on CRAN: Click here


Download and install ccml package within the R console
Install from CRAN:
install.packages("ccml")

Install from Github:
library("remotes")
install_github("cran/ccml")

Install by package version:
library("remotes")
install_version("ccml", "1.4.0")



Attach the package and use:
library("ccml")
Maintained by
Chuanxing Li
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-08-18
Latest Update:
Description:
Consensus clustering, also called meta-clustering or cluster ensembles, has been increasingly used in clinical data. Current consensus clustering methods tend to ensemble a number of different clusters from mathematical replicates with similar sample coverage. As the fact of common variety of sample coverage in the real-world data, a new consensus clustering strategy dealing with such biological replicates is required. This is a two-step consensus clustering package, which is used to input multiple predictive labels with different sample coverage (missing labels).
How to cite:
Chuanxing Li (2022). ccml: Consensus Clustering for Different Sample Coverage Data. R package version 1.4.0, https://cran.r-project.org/web/packages/ccml. Accessed 07 Mar. 2026.
Previous versions and publish date:
1.0.0 (2022-08-18 10:00), 1.1.0 (2022-08-29 10:30), 1.2.0 (2022-12-14 08:30), 1.3.0 (2023-08-23 15:40), 1.4.0 (2023-08-30 08:10)
Other packages that cited ccml R package
View ccml citation profile
Other R packages that ccml depends, imports, suggests or enhances
Complete documentation for ccml
Functions, R codes and Examples using the ccml R package
Some associated functions: callNCW . ccml . example_data . plotCompareCW . randConsensusMatrix . spectralClusteringAffinity . 
Some associated R codes: callNCW.R . ccml.R . example_data.R . globals.R . plotCompareCW.R . randConsensusMatrix.R . spectralClusteringAffinity.R .  Full ccml package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

testDriveR  
Teaching Data for Statistics and Data Science
Provides data sets for teaching statistics and data science courses. It includes a sample of data f ...
Download / Learn more Package Citations See dependency  
SAMtool  
Stock Assessment Methods Toolkit
Simulation tools for closed-loop simulation are provided for the 'MSEtool' operating model to inform ...
Download / Learn more Package Citations See dependency  
lmSubsets  
Exact Variable-Subset Selection in Linear Regression
Exact and approximation algorithms for variable-subset selection in ordinary linear regression mode ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
portalr  
Create Useful Summaries of the Portal Data
Download and generate summaries for the rodent, plant, ant, and weather data from the Portal Projec ...
Download / Learn more Package Citations See dependency  
ReviewR  
A Light-Weight, Portable Tool for Reviewing Individual Patient Records
A portable Shiny tool to explore patient-level electronic health record data and perform chart revi ...
Download / Learn more Package Citations See dependency  

26,264

R Packages

223,360

Dependencies

70,376

Author Associations

26,265

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA