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canprot  

Chemical Analysis of Proteins
View on CRAN: Click here


Download and install canprot package within the R console
Install from CRAN:
install.packages("canprot")

Install from Github:
library("remotes")
install_github("cran/canprot")

Install by package version:
library("remotes")
install_version("canprot", "2.0.0")



Attach the package and use:
library("canprot")
Maintained by
Jeffrey Dick
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-06-13
Latest Update: 2022-01-17
Description:
Chemical analysis of proteins based on their amino acid compositions. Amino acid compositions can be read from FASTA files and used to calculate chemical metrics including carbon oxidation state and stoichiometric hydration state, as described in Dick et al. (2020) . Other properties that can be calculated include protein length, grand average of hydropathy (GRAVY), isoelectric point (pI), molecular weight (MW), standard molal volume (V0), and metabolic costs (Akashi and Gojobori, 2002 ; Wagner, 2005 ; Zhang et al., 2018 ). A database of amino acid compositions of human proteins derived from UniProt is provided.
How to cite:
Jeffrey Dick (2017). canprot: Chemical Analysis of Proteins. R package version 2.0.0, https://cran.r-project.org/web/packages/canprot. Accessed 22 Dec. 2024.
Previous versions and publish date:
0.1.0 (2017-06-13 22:57), 0.1.1 (2018-01-18 06:45), 0.1.2 (2019-02-26 22:40), 1.0.0 (2020-05-11 13:10), 1.1.0 (2020-10-19 06:30), 1.1.2 (2022-01-17 09:22)
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