Other packages > Find by keyword >

cancerGI  

Analyses of Cancer Gene Interaction
View on CRAN: Click here


Download and install cancerGI package within the R console
Install from CRAN:
install.packages("cancerGI")

Install from Github:
library("remotes")
install_github("cran/cancerGI")

Install by package version:
library("remotes")
install_version("cancerGI", "1.0.1")



Attach the package and use:
library("cancerGI")
Maintained by
Audrey Q. Fu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-04-01
Latest Update: 2023-09-07
Description:
Functions to perform the following analyses: i) inferring epistasis from RNAi double knockdown data; ii) identifying gene pairs of multiple mutation patterns; iii) assessing association between gene pairs and survival; and iv) calculating the smallworldness of a graph (e.g., a gene interaction network). Data and analyses are described in Wang, X., Fu, A. Q., McNerney, M. and White, K. P. (2014). Widespread genetic epistasis among breast cancer genes. Nature Communications. 5 4828. .
How to cite:
Audrey Q. Fu (2016). cancerGI: Analyses of Cancer Gene Interaction. R package version 1.0.1, https://cran.r-project.org/web/packages/cancerGI. Accessed 27 Jul. 2026.
Previous versions and publish date:
(2026-07-09 07:24), 1.0.0 (2016-04-01 16:42)
Other packages that cited cancerGI R package
View cancerGI citation profile
Other R packages that cancerGI depends, imports, suggests or enhances
Complete documentation for cancerGI
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

pgam  
Poisson-Gamma Additive Models
This work is an extension of the state space model for Poisson count data, Poisson-Gamma model, towa ...
Download / Learn more Package Citations See dependency  
structree  
Tree-Structured Clustering
Tree-structured modelling of categorical predictors (Tutz and Berger (2018), < ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  

27,987

R Packages

239,283

Dependencies

74,234

Author Associations

27,988

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA