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bsam  

Bayesian State-Space Models for Animal Movement
View on CRAN: Click here


Download and install bsam package within the R console
Install from CRAN:
install.packages("bsam")

Install from Github:
library("remotes")
install_github("cran/bsam")

Install by package version:
library("remotes")
install_version("bsam", "1.1.3")



Attach the package and use:
library("bsam")
Maintained by
Ian Jonsen
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-08-06
Latest Update: 2020-09-01
Description:
Tools to fit Bayesian state-space models to animal tracking data. Models are provided for location filtering, location filtering and behavioural state estimation, and their hierarchical versions. The models are primarily intended for fitting to ARGOS satellite tracking data but options exist to fit to other tracking data types. For Global Positioning System data, consider the 'moveHMM' package. Simplified Markov Chain Monte Carlo convergence diagnostic plotting is provided but users are encouraged to explore tools available in packages such as 'coda' and 'boa'.
How to cite:
Ian Jonsen (2016). bsam: Bayesian State-Space Models for Animal Movement. R package version 1.1.3, https://cran.r-project.org/web/packages/bsam. Accessed 08 Oct. 2026.
Previous versions and publish date:
(2026-07-09 07:23), 1.0.0 (2016-08-06 14:35), 1.1.0 (2016-11-01 11:07), 1.1.1 (2016-11-17 14:34), 1.1.2 (2017-07-01 04:50), 1.1.3 (2020-09-01 15:40)
Other packages that cited bsam R package
View bsam citation profile
Other R packages that bsam depends, imports, suggests or enhances
Complete documentation for bsam
Functions, R codes and Examples using the bsam R package
Some associated functions: bsam-deprecated . bsam-package . dat4jags . diag_ssm . ellie1 . ellie2 . fit_ssm . get_summary . hssm . map_ssm . plot_fit . simulate . ssm . tpar . 
Some associated R codes: bsam-deprecated.R . bsam-package.R . dat4jags.R . diag_ssm.R . fit_ssm.R . get_summary.R . hssm.R . map_ssm.R . plot_fit.R . ssm.R . tpar.R .  Full bsam package functions and examples
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