Other packages > Find by keyword >

biospear  

Biomarker Selection in Penalized Regression Models
View on CRAN: Click here


Download and install biospear package within the R console
Install from CRAN:
install.packages("biospear")

Install from Github:
library("remotes")
install_github("cran/biospear")

Install by package version:
library("remotes")
install_version("biospear", "1.0.2")



Attach the package and use:
library("biospear")
Maintained by
Stefan Michiels
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-05-13
Latest Update: 2018-12-04
Description:
Provides some tools for developing and validating prediction models, estimate expected survival of patients and visualize them graphically. Most of the implemented methods are based on penalized regressions such as: the lasso (Tibshirani R (1996)), the elastic net (Zou H et al. (2005) ), the adaptive lasso (Zou H (2006) ), the stability selection (Meinshausen N et al. (2010) ), some extensions of the lasso (Ternes et al. (2016) ), some methods for the interaction setting (Ternes N et al. (2016) ), or others. A function generating simulated survival data set is also provided.
How to cite:
Stefan Michiels (2017). biospear: Biomarker Selection in Penalized Regression Models. R package version 1.0.2, https://cran.r-project.org/web/packages/biospear. Accessed 25 Jun. 2026.
Previous versions and publish date:
1.0.0 (2017-05-13 14:55), 1.0.1 (2017-08-11 11:56)
Other packages that cited biospear R package
View biospear citation profile
Other R packages that biospear depends, imports, suggests or enhances
Complete documentation for biospear
Functions, R codes and Examples using the biospear R package
Some associated functions: BMsel . Breast . expSurv . predRes . selRes . simdata . 
Some associated R codes: BMsel.R . PCAlasso.R . PLSlasso.R . alasso.R . colCheck.R . dataTrans.R . enet.R . expSurv.R . gboost.R . glasso.R . lGrid.R . lasso.R . modCov.R . penExt.R . poissonize.R . predRes.R . ridge.R . ridgelasso.R . selRes.R . simdata.R . simdataV.R . stabSel.R . uniFDR.R . unii.R .  Full biospear package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

foster  
Forest Structure Extrapolation with R
Set of tools to streamline the modeling of the relationship betweensatellite imagery time series or ...
Download / Learn more Package Citations See dependency  
airGRiwrm  
'airGR' Integrated Water Resource Management
Semi-distributed Precipitation-Runoff Modelling based on 'airGR' package models integrating human i ...
Download / Learn more Package Citations See dependency  
edeaR  
Exploratory and Descriptive Event-Based Data Analysis
Exploratory and descriptive analysis of event based data. Provides methods for describing and select ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
sitmo  
Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files
Provided within are two high quality and fast PPRNGs that may be used in an 'OpenMP' parallel enviro ...
Download / Learn more Package Citations See dependency  

27,535

R Packages

236,180

Dependencies

73,223

Author Associations

27,536

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA