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biosampleR  

Biodiversity Index Calculation and Bootstrap Confidence Interval Estimation
View on CRAN: Click here


Download and install biosampleR package within the R console
Install from CRAN:
install.packages("biosampleR")

Install from Github:
library("remotes")
install_github("cran/biosampleR")

Install by package version:
library("remotes")
install_version("biosampleR", "1.0.4")



Attach the package and use:
library("biosampleR")
Maintained by
Craig Eric Simpkins
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-09-13
Latest Update: 2023-09-13
Description:
Provides tools for the calculation of common biodiversity indices from count data. Additionally, it incorporates bootstrapping techniques to generate multiple samples, facilitating the estimation of confidence intervals around these indices. Furthermore, the package allows for the exploration of how variation in these indices changes with differing numbers of sites, making it a useful tool with which to begin an ecological analysis. Methods are based on the following references: Chao et al. (2014) , Chao and Colwell (2022) , Hsieh, Ma,` and Chao (2016) .
How to cite:
Craig Eric Simpkins (2023). biosampleR: Biodiversity Index Calculation and Bootstrap Confidence Interval Estimation. R package version 1.0.4, https://cran.r-project.org/web/packages/biosampleR. Accessed 31 Jan. 2025.
Previous versions and publish date:
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Complete documentation for biosampleR
Functions, R codes and Examples using the biosampleR R package
Some associated functions: BCI . calc_delta_var . calc_diversity_indices . create_resample . generate_subsamples . get_sample_stats . 
Some associated R codes: BCI.R . calc_delta_var.R . calc_diversity_indices.R . create_resample.R . generate_subsamples.R . get_sample_stats.R .  Full biosampleR package functions and examples
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