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bioregion
View on CRAN: Click
here
Download and install bioregion package within the R console
Install from CRAN:
install.packages("bioregion")
Install from Github:
library("remotes")
install_github("cran/bioregion") Install by package version:
library("remotes")
install_version("bioregion", "1.2.0") Attach the package and use:
library("bioregion")
Maintained by
Maxime Lenormand
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-04-14
Latest Update: 2025-01-31
Description:
The main purpose of this package is to propose a transparent methodological framework to compare bioregionalisation methods based on hierarchical and non-hierarchical clustering algorithms (Kreft & Jetz (2010) ) and network algorithms (Lenormand et al. (2019) and Leroy et al. (2019) ).
How to cite:
Maxime Lenormand (2023). bioregion: Comparison of Bioregionalisation Methods. R package version 1.2.0, https://cran.r-project.org/web/packages/bioregion. Accessed 07 Jun. 2026.
Previous versions and publish date:
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Other R packages that bioregion depends,
imports, suggests or enhances
Complete documentation for bioregion
Functions, R codes and Examples using
the bioregion R package
Some associated functions: compare_partitions . cut_tree . dissimilarity . dissimilarity_to_similarity . find_optimal_n . fishdf . fishmat . fishsf . hclu_hierarclust . hclu_optics . install_binaries . map_clusters . mat_to_net . net_to_mat . netclu_beckett . netclu_greedy . netclu_infomap . netclu_labelprop . netclu_leadingeigen . netclu_leiden . netclu_louvain . netclu_oslom . netclu_walktrap . nhclu_dbscan . nhclu_kmeans . nhclu_pam . partition_metrics . similarity . similarity_to_dissimilarity . vegedf . vegemat . vegesf .
Some associated R codes: RcppExports.R . compare_partitions.R . cut_tree.R . data.R . dissimilarity.R . elbow_method.R . find_optimal_n.R . generic_functions.R . hclu_hierarclust.R . hclu_optics.R . install_binaries.R . map_clusters.R . mat_to_net.R . net_to_mat.R . netclu_beckett.R . netclu_greedy.R . netclu_infomap.R . netclu_labelprop.R . netclu_leadingeigen.R . netclu_leiden.R . netclu_louvain.R . netclu_oslom.R . netclu_walktrap.R . nhclu_dbscan.R . nhclu_kmeans.R . nhclu_pam.R . package.R . partition_metrics.R . similarity.R . similarity_dissimilarity_conversion.R . utils.R . Full bioregion package functions and examples
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